Factsheet for TraesCS2D01G506400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G533900.1	Wheat	nucleus	96.05	96.51
HORVU7Hr1G037200.1	Barley	nucleus	32.39	95.79
HORVU1Hr1G088100.1	Barley	cytosol	24.17	95.03
HORVU3Hr1G112740.3	Barley	nucleus	32.7	92.41
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	31.6	89.29
KXG40069	Sorghum	nucleus	83.25	83.65
Os08t0341700-01	Rice	nucleus	83.1	82.57
Zm00001d050131_P002	Maize	cytosol	73.3	72.61
GSMUA_Achr7P06190_001	Banana	cytosol	57.66	63.26
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	59.87	62.13
TraesCS7D01G238000.2	Wheat	cytosol	53.24	55.7
TraesCS6D01G265200.1	Wheat	cytosol	53.4	54.6
VIT_19s0015g01160.t01	Wine grape	cytosol	52.29	53.3
KRH45371	Soybean	cytosol	36.49	52.5
KRH62508	Soybean	cytosol	51.34	52.42
KRH56402	Soybean	cytosol	51.03	52.1
HORVU1Hr1G091860.1	Barley	cytosol	13.27	51.53
Solyc07g066090.2.1	Tomato	nucleus	49.13	50.16
PGSC0003DMT400057292	Potato	nucleus	48.82	50.0
KRH07662	Soybean	cytosol	48.5	49.6
CDY11954	Canola	cytosol	15.01	48.72
CDY11957	Canola	cytosol	33.97	48.31
AT1G55690.4	Thale cress	nucleus	47.39	48.0
CDY10540	Canola	cytosol, nucleus, plastid	48.18	47.43
CDY42378	Canola	nucleus	48.03	47.28
Solyc10g005740.1.1	Tomato	nucleus	45.97	47.09
Bra030841.1-P	Field mustard	nucleus	43.92	46.41
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	46.92	45.62
CDY50018	Canola	vacuole	45.66	45.23
PGSC0003DMT400022405	Potato	cytosol, nucleus	40.92	44.5
CDY51073	Canola	mitochondrion, nucleus	34.76	43.05
TraesCS3D01G255900.4	Wheat	cytosol	41.55	42.76
TraesCS2D01G335700.2	Wheat	nucleus	39.65	42.47
Bra002841.1-P	Field mustard	cytosol	34.6	41.87
AT5G56160.1	Thale cress	cytosol	38.07	41.77
CDY51966	Canola	cytosol	39.18	41.68
CDY17397	Canola	cytosol	39.02	41.51
TraesCS2D01G500100.2	Wheat	mitochondrion	24.8	40.15
CDY36780	Canola	plastid	35.07	38.95
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	43.92	38.94
TraesCS6D01G085200.1	Wheat	plastid	36.18	37.24
Bra038012.1-P	Field mustard	cytosol	45.5	27.22
Bra028944.1-P	Field mustard	plastid	29.54	26.87
TraesCS5D01G174400.1	Wheat	cytosol	13.9	26.27
TraesCS6D01G149100.1	Wheat	cytosol	13.11	25.38
TraesCS7D01G375200.1	Wheat	cytosol	12.64	24.62
Bra002840.1-P	Field mustard	cytosol	0.16	1.3
CDY36781	Canola	extracellular	0.16	0.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF95	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	EnsemblPlantsGene:TraesCS2D01G506400	EnsemblPlants:TraesCS2D01G506400.1	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr2D:+:600295661..600299970

Molecular Weight (calculated)

72439.8 Da

IEP (calculated)

8.517

GRAVY (calculated)

-0.547

Length

633 amino acids

Sequence
(BLAST)

001: MSVRRRSEST EGLFLFDERK DRRSDVENSE DERRRLSIGG SLKKKALNAS SKLTHSLKKR GKRKVEHRAS SFTIEDVRDE EEERAVFTFQ QELLSRNLLC
101: DKQNDYHMLL RFLKARKFDT EKAIHMWAEM LQWRKEFGAD TILEDFVFEE LDEVLSYYPQ GYHGVDRQGR PVYIERLGKV DPNKLMNITT VDRYIKYHVQ
201: EFERAFLDKF PACSIAAKRH IGSTTTILDV EGVGFKNFSK TAREMLTRMQ KIDSDYYPET LHQMFVVNAG GGFKLLWNSV KGFLDPKTVS KIHVLGTKFQ
301: SKLLEVIDGS QLPEFLGGTC TCAGEAGCLK SNKGPWNDPN IMKVAHNKEA KFSRHTRRLS EIEQRRGSFA RLHLLKGRNS DTSTAESGSD VDDLGSPMMR
401: STLGCSRLAP VREEMQMRAR ESAAYYSCDD HFVVVDKTVD YGRGGSVPDK TCASEVRVQA RRLGTDTTQS IPDSSRNSRG ILVPKEMPEE GKFYRFLRLL
501: LVLVVRVFTF LRTVCSQPEI TMVNNPLPPA PEFEPISGEH PALEAFSVDC VRPVIERLQK LEGQVDELGS KPPEIPLEKE RSLLDSWDRI KCIESDLERT
601: KKVLQATVMK QLEIADSVEE VILSKLHRRR FCA

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.