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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • plastid 1
  • nucleus 2
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50018 Canola vacuole 87.08 69.64
AT1G55690.4 Thale cress nucleus 75.93 62.08
CDY42378 Canola nucleus 76.52 60.81
CDY10540 Canola cytosol, nucleus, plastid 76.13 60.5
Zm00001d039981_P001 Maize cytosol 12.33 51.22
KRH45371 Soybean cytosol 44.03 51.14
Zm00001d031251_P001 Maize cytosol, mitochondrion 12.52 49.61
VIT_19s0015g01160.t01 Wine grape cytosol 60.27 49.6
HORVU1Hr1G088100.1 Barley cytosol 15.46 49.07
Zm00001d012531_P001 Maize mitochondrion 12.52 48.85
Solyc07g066090.2.1 Tomato nucleus 56.95 46.94
PGSC0003DMT400057292 Potato nucleus 56.75 46.93
KRH56402 Soybean cytosol 55.97 46.13
KRH62508 Soybean cytosol 55.19 45.48
KRH07662 Soybean cytosol 54.79 45.23
PGSC0003DMT400022405 Potato cytosol, nucleus 49.9 43.81
Solyc10g005740.1.1 Tomato nucleus 52.64 43.53
CDY11954 Canola cytosol 16.44 43.08
CDY11957 Canola cytosol 37.38 42.92
HORVU7Hr1G037200.1 Barley nucleus 17.03 40.65
HORVU3Hr1G112740.3 Barley nucleus 17.61 40.18
HORVU7Hr1G040650.2 Barley cytosol, nucleus, plastid 17.61 40.18
CDY17397 Canola cytosol 44.81 38.49
CDY51966 Canola cytosol 44.81 38.49
GSMUA_Achr4P09770_001 Banana cytosol 34.25 38.38
GSMUA_Achr7P06190_001 Banana cytosol 42.66 37.78
GSMUA_Achr3P11960_001 Banana cytosol, plastid 44.42 37.21
CDX99587 Canola cytosol, mitochondrion 20.55 37.1
GSMUA_Achr3P04130_001 Banana nucleus 45.01 36.92
GSMUA_Achr5P04200_001 Banana plastid 44.81 36.64
CDY15888 Canola cytosol 20.16 36.4
KXG40069 Sorghum nucleus 44.42 36.03
Os02t0721800-01 Rice cytosol 42.86 35.78
Os08t0341700-01 Rice nucleus 44.42 35.64
TraesCS7D01G238000.2 Wheat cytosol 42.07 35.54
TraesCS6D01G265200.1 Wheat cytosol 42.86 35.38
TraesCS6A01G284800.1 Wheat cytosol 42.86 35.32
HORVU6Hr1G071770.19 Barley cytosol 42.66 35.28
OQU80990 Sorghum cytosol 41.88 35.26
TraesCS6B01G313500.1 Wheat cytosol 42.66 35.22
Zm00001d017876_P018 Maize cytosol 42.27 35.01
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 45.21 35.0
TraesCS2B01G533900.1 Wheat nucleus 43.05 34.92
KXG30865 Sorghum cytosol 42.07 34.85
TraesCS2D01G506400.1 Wheat nucleus 43.05 34.76
Zm00001d051674_P037 Maize cytosol 41.49 34.64
Zm00001d045670_P001 Maize cytosol 12.72 34.57
CDY36780 Canola plastid 38.36 34.39
Os09t0481100-01 Rice nucleus 40.9 34.21
Os08t0497300-01 Rice cytosol, plastid 40.31 34.11
Zm00001d005995_P003 Maize nucleus 39.92 34.06
EER96946 Sorghum cytosol, nucleus, plastid 39.73 33.89
CDY52084 Canola cytosol 38.36 33.39
CDY12126 Canola cytosol 34.25 32.71
HORVU7Hr1G048880.11 Barley mitochondrion 41.29 32.61
CDX90317 Canola cytosol 34.05 32.4
TraesCS7B01G135600.2 Wheat plastid 42.07 32.23
TraesCS7A01G240000.3 Wheat endoplasmic reticulum, plastid 42.27 32.19
Zm00001d031316_P020 Maize cytosol 40.51 32.09
CDX77382 Canola cytosol 38.75 31.99
Zm00001d050131_P002 Maize cytosol 39.92 31.92
Zm00001d035770_P002 Maize cytosol, endoplasmic reticulum 18.4 31.65
CDX89709 Canola cytosol, mitochondrion 27.79 31.21
CDY45318 Canola cytosol, plastid 30.53 31.2
Zm00001d045718_P001 Maize cytosol 15.26 30.83
CDY15887 Canola cytosol 33.07 30.78
CDX99586 Canola cytosol 33.07 30.73
CDX69071 Canola cytosol 32.09 30.71
CDX75444 Canola cytosol 32.09 30.71
Zm00001d043774_P001 Maize cytosol 5.09 30.59
CDX82040 Canola cytosol 35.62 30.18
CDY12125 Canola cytosol 36.01 29.87
CDY17730 Canola cytosol 23.48 29.85
CDX90316 Canola cytosol 36.01 29.77
Zm00001d052840_P016 Maize plastid 41.49 29.24
CDX77773 Canola cytosol 23.29 29.24
CDY13810 Canola cytosol 36.01 29.11
Zm00001d037983_P001 Maize cytosol 13.31 28.81
CDX68133 Canola cytosol 34.25 28.78
CDY17469 Canola cytosol 32.09 28.72
CDX85889 Canola cytosol 34.05 28.67
CDY39363 Canola cytosol 33.07 28.55
CDY29415 Canola nucleus 33.46 27.8
CDX76291 Canola cytosol 32.09 27.7
HORVU1Hr1G091860.1 Barley cytosol 8.41 26.38
Zm00001d010393_P001 Maize plastid 18.2 25.55
CDX69225 Canola mitochondrion 29.55 24.88
Zm00001d014589_P001 Maize cytosol 4.7 24.74
Zm00001d008240_P001 Maize cytosol, extracellular, mitochondrion, nucleus 8.22 21.21
CDY41066 Canola cytosol 10.96 16.82
CDY25949 Canola cytosol 10.76 16.52
CDY28908 Canola cytosol 10.57 16.31
CDY40544 Canola cytosol 10.37 16.06
Zm00001d047488_P001 Maize nucleus 4.89 15.62
CDY52903 Canola cytosol 9.98 15.6
CDY53762 Canola cytosol 9.98 15.6
CDX77792 Canola cytosol 10.18 15.57
CDY10527 Canola cytosol 9.59 15.08
CDY42389 Canola cytosol 9.59 15.08
CDY17710 Canola cytosol 9.78 14.97
Zm00001d035370_P003 Maize plastid 9.78 12.25
CDY02262 Canola cytosol, plastid 31.7 11.24
Zm00001d005778_P001 Maize plastid 4.7 8.54
CDY36781 Canola extracellular 0.39 1.19
Protein Annotations
EnsemblPlants:CDY51073EnsemblPlantsGene:GSBRNA2T00098124001Gene3D:3.40.525.10InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251InterPro:IPR036865PANTHER:PTHR23324PANTHER:PTHR23324:SF84PFAM:PF00650PFscan:PS50191
ProteinID:CDY51073ProteinID:CDY51073.1SEG:segSMART:SM00516SUPFAM:SSF46938SUPFAM:SSF52087
UniParc:UPI0004EF32E9UniProt:A0A078IPR6MapMan:35.1:::
Description
BnaC06g07500DBnaC06g07500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPR6]
Coordinates
chrLK032962:+:50756..53237
Molecular Weight (calculated)
59281.7 Da
IEP (calculated)
9.826
GRAVY (calculated)
-0.562
Length
511 amino acids
Sequence
(BLAST)
001: MGNLKKKAIN ASTKFTHSLK KRGKRKIDYR FPPVASIEDE KEETLVLEFR RHLLHRDLLP PRHDDYHTLL RFLKLNIEKT IQMLIWHHQL DFEFEELEEV
101: LQYYPHVYIE RLGKAHPSKL MRITTIVRYL KYHVQEFERA LLEKFPACSI AAKRRIYSST TILDVQGLGM KNFTSAGASL VAAMAKIDNS YYPETLHRMY
201: IVNAGTGFKK MLWPAAQKFL DAKTITKNTC ISSQPSATTH PNYTKSLIQG SLLSIHTTPG IIWCLRSNKG PWNDPETMKL IYRGESSLFR QITRKLSDPQ
301: NSSSYISIHT SKAMQAETYE EARTSDVNGY YSCDDKFAIP TNRRGQERQS HYQMLEHDLS SKGTLDSIKP ESLAKRILSF LLKLAAVFRY IPFELSRKKH
401: TITLSSPRED ESRCTLTPTP TETTMKDRIG PCLERIHKLE KKYEEIRNKP VEIPVEKERL LMDSLDRIKS VEFDLEKTKR ALHATVMKQM EITEMLENIR
501: ESQLHVSPSS P
Best Arabidopsis Sequence Match ( AT1G55690.3 )
(BLAST)
001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHVR T
Arabidopsis Description
SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.