Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52903 | Canola | cytosol | 98.78 | 98.78 |
| CDY42389 | Canola | cytosol | 93.58 | 94.15 |
| CDY10527 | Canola | cytosol | 93.27 | 93.85 |
| AT1G55840.1 | Thale cress | cytosol | 90.52 | 91.08 |
| Os09t0258000-01 | Rice | cytosol | 65.44 | 63.88 |
| CDY40544 | Canola | cytosol | 63.91 | 63.33 |
| TraesCS5D01G174400.1 | Wheat | cytosol | 64.83 | 63.28 |
| EER96447 | Sorghum | cytosol | 64.83 | 63.28 |
| TraesCS5A01G170000.1 | Wheat | cytosol | 64.83 | 63.28 |
| TraesCS5B01G166800.1 | Wheat | cytosol | 64.83 | 63.28 |
| CDX77792 | Canola | cytosol | 64.53 | 63.17 |
| CDY28908 | Canola | cytosol | 63.91 | 63.14 |
| CDY17710 | Canola | cytosol | 64.22 | 62.87 |
| CDY41066 | Canola | cytosol | 63.91 | 62.76 |
| HORVU5Hr1G052230.2 | Barley | cytosol | 64.22 | 62.5 |
| CDY25949 | Canola | cytosol | 63.61 | 62.46 |
| Zm00001d005118_P002 | Maize | cytosol | 61.16 | 50.76 |
| CDX99587 | Canola | cytosol, mitochondrion | 22.02 | 25.44 |
| CDY15888 | Canola | cytosol | 21.71 | 25.09 |
| CDY11954 | Canola | cytosol | 11.31 | 18.97 |
| CDX77773 | Canola | cytosol | 23.24 | 18.67 |
| CDY17730 | Canola | cytosol | 22.94 | 18.66 |
| CDY11957 | Canola | cytosol | 22.32 | 16.4 |
| CDX89709 | Canola | cytosol, mitochondrion | 22.02 | 15.82 |
| CDX82040 | Canola | cytosol | 28.44 | 15.42 |
| CDX90317 | Canola | cytosol | 25.08 | 15.27 |
| CDY12126 | Canola | cytosol | 24.77 | 15.14 |
| CDY15887 | Canola | cytosol | 25.38 | 15.12 |
| CDX99586 | Canola | cytosol | 25.38 | 15.09 |
| CDX75444 | Canola | cytosol | 24.46 | 14.98 |
| CDX69071 | Canola | cytosol | 24.46 | 14.98 |
| CDY13810 | Canola | cytosol | 28.44 | 14.72 |
| CDY52084 | Canola | cytosol | 26.3 | 14.65 |
| CDY45318 | Canola | cytosol, plastid | 22.32 | 14.6 |
| CDY39363 | Canola | cytosol | 26.3 | 14.53 |
| CDY12125 | Canola | cytosol | 27.22 | 14.45 |
| CDX90316 | Canola | cytosol | 27.22 | 14.4 |
| CDY17469 | Canola | cytosol | 24.77 | 14.19 |
| CDX85889 | Canola | cytosol | 26.3 | 14.17 |
| CDX77382 | Canola | cytosol | 26.61 | 14.05 |
| CDX68133 | Canola | cytosol | 25.99 | 13.98 |
| CDY42378 | Canola | nucleus | 27.22 | 13.84 |
| CDY29415 | Canola | nucleus | 25.99 | 13.82 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 26.91 | 13.69 |
| CDX76291 | Canola | cytosol | 24.77 | 13.68 |
| CDY36780 | Canola | plastid | 22.94 | 13.16 |
| CDY50018 | Canola | vacuole | 25.38 | 12.99 |
| CDY51966 | Canola | cytosol | 22.63 | 12.44 |
| CDY17397 | Canola | cytosol | 22.63 | 12.44 |
| CDX69225 | Canola | mitochondrion | 22.94 | 12.36 |
| CDY51073 | Canola | mitochondrion, nucleus | 15.6 | 9.98 |
| CDY02262 | Canola | cytosol, plastid | 24.46 | 5.55 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A078IUS8 | EnsemblPlants:CDY53762 | ProteinID:CDY53762 | ProteinID:CDY53762.1 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:GSBRNA2T00011347001 |
| InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF140 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EAC8CD |
Description
BnaCnng25540DBnaCnng25540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUS8]
Coordinates
chrLK033234:-:51336..53883
Molecular Weight (calculated)
37314.9 Da
IEP (calculated)
8.066
GRAVY (calculated)
-0.438
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMASEEAVK QLRTLMEDVE DESLRESYRN IHQGYPTETL LRFLKARDFN VHKSHKMLLD CLEWRTQNEI DNILTKPIVP VELYRGIRDS QLVGLSGYSK
101: EGLPVIAIGV GLSTYDKASV HYYVQSHIQM NEYRDRVVLP SATKKQGRPI STCLKILDMS GLKLSALSQI KLMTTITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGTED NCFSLDHSFH QELYSYVKQQ ALVKGPSSAP IRHGSVHVRF
301: PEPATEGTKI FDTLESEFQK LGCDQKV
101: EGLPVIAIGV GLSTYDKASV HYYVQSHIQM NEYRDRVVLP SATKKQGRPI STCLKILDMS GLKLSALSQI KLMTTITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGTED NCFSLDHSFH QELYSYVKQQ ALVKGPSSAP IRHGSVHVRF
301: PEPATEGTKI FDTLESEFQK LGCDQKV
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.