Factsheet for TraesCS7A01G240000.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G238000.2	Wheat	cytosol	88.38	98.02
TraesCS7B01G135600.2	Wheat	plastid	92.55	93.1
HORVU7Hr1G048880.11	Barley	mitochondrion	86.89	90.11
Zm00001d039981_P001	Maize	cytosol	16.1	87.8
OQU80990	Sorghum	cytosol	73.92	81.71
Zm00001d014589_P001	Maize	cytosol	11.48	79.38
Os08t0497300-01	Rice	cytosol, plastid	71.24	79.14
Zm00001d045718_P001	Maize	cytosol	28.46	75.49
Zm00001d031316_P020	Maize	cytosol	71.09	73.95
Zm00001d052840_P016	Maize	plastid	71.68	66.34
Zm00001d045670_P001	Maize	cytosol	18.33	65.43
Zm00001d010393_P001	Maize	plastid	33.83	62.36
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	18.33	62.12
GSMUA_Achr4P09770_001	Banana	cytosol	40.39	59.43
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	25.19	56.9
TraesCS6A01G284800.1	Wheat	cytosol	51.12	55.32
GSMUA_Achr3P04130_001	Banana	nucleus	49.93	53.77
GSMUA_Achr5P04200_001	Banana	plastid	48.88	52.48
KRH45371	Soybean	cytosol	33.23	50.68
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	49.78	50.61
VIT_19s0015g01160.t01	Wine grape	cytosol	45.16	48.79
KRH62508	Soybean	cytosol	44.86	48.55
KRH56402	Soybean	cytosol	44.56	48.23
CDY11954	Canola	cytosol	13.71	47.18
KRH07662	Soybean	cytosol	43.52	47.17
CDY42378	Canola	nucleus	44.56	46.5
CDY10540	Canola	cytosol, nucleus, plastid	44.41	46.35
CDY11957	Canola	cytosol	30.55	46.07
Zm00001d037983_P001	Maize	cytosol	16.1	45.76
Solyc07g066090.2.1	Tomato	nucleus	42.18	45.65
AT1G55690.4	Thale cress	nucleus	42.32	45.44
Bra030841.1-P	Field mustard	nucleus	40.54	45.41
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	42.47	45.24
CDY50018	Canola	vacuole	42.62	44.76
PGSC0003DMT400057292	Potato	nucleus	41.13	44.66
Zm00001d047488_P001	Maize	nucleus	10.43	43.75
Solyc10g005740.1.1	Tomato	nucleus	39.79	43.2
CDY51073	Canola	mitochondrion, nucleus	32.19	42.27
TraesCS2A01G499900.1	Wheat	mitochondrion	24.29	41.48
TraesCS2A01G327200.2	Wheat	nucleus	36.21	41.12
PGSC0003DMT400022405	Potato	cytosol, nucleus	35.47	40.89
AT5G56160.1	Thale cress	cytosol	35.02	40.73
CDY51966	Canola	cytosol	35.62	40.17
Bra002841.1-P	Field mustard	cytosol	31.15	39.96
CDY17397	Canola	cytosol	35.32	39.83
TraesCS3A01G255000.6	Wheat	cytosol	37.11	39.03
TraesCS6A01G097200.1	Wheat	plastid	35.02	38.34
CDY36780	Canola	plastid	32.49	38.25
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	39.34	37.08
Zm00001d035370_P003	Maize	plastid	17.73	29.17
Bra038012.1-P	Field mustard	cytosol	42.18	26.75
Bra028944.1-P	Field mustard	plastid	27.57	26.58
TraesCS5A01G170000.1	Wheat	cytosol	12.82	25.67
TraesCS6A01G164200.1	Wheat	cytosol	12.37	25.38
TraesCS7A01G378400.1	Wheat	cytosol	12.22	25.23
Zm00001d005778_P001	Maize	plastid	8.64	20.64
Bra002840.1-P	Field mustard	cytosol	0.15	1.3
CDY36781	Canola	extracellular	0.15	0.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF65	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7A01G240000	EnsemblPlants:TraesCS7A01G240000.3	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr7A:-:214854674..214858986

Molecular Weight (calculated)

76035.7 Da

IEP (calculated)

7.361

GRAVY (calculated)

-0.491

Length

671 amino acids

Sequence
(BLAST)

001: MYATPLPLPP PHPSEIWSPT LLLLLLPPPC ASFPLVSWIC LGEGRRAPFE RGLRAGVSKK SNLEEKMSVI HADDIEISLC DGNSEDERRR RKIGSLRRKA
101: IHALKKRGRR RVDFRFPPAI SIEDVRDAEE ERAVSAFRER LAAHGLLPDK HDDYHMMLRF LKARKFDAEK AMQMWADMLR WRKEFGADTI LEDFEFDELD
201: EVLCYYPQGY HGVDREGRPV YIERLGKVDP NKLMQITSVD RYIKYHVQEF ERAFGEKFPA CTLAAKRHID STTTILDVQG VGFKNFSKTA RELVHRMQKI
301: DSDYYPETLH QMFVVNAGSG FKLIWNSVKG FLDPKTSSKI HVLGSNYQSR LLEVIDPSEL PEFLGGSCTC IDKGGCLGSN KGPWNDPYIL KLIHNLEAGS
401: VRDIKPVSEG EERSDSSLRL EQLKWQGMMS DTSNAESGSD VDDFGSSVIP KGAEYGCLTP VHEEVKGIDS TYYVCYEQSS LETSLETGRR LRRTTETVPK
501: QLADNRQFST NGSPRDLGSN VGNLDGSIVR WGFENLVKVV TALIKLFSFF KLFISSRALR RLENARPSTV AVPAAEKPQP RTISADEMSA CLQRIENLES
601: VCNHLASKPP EMPEDKEQQL LNSFERIRSI EADLERTKRA LHATVAKQNS LAETLEAVQE SSRVKRRLFC S

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.