Factsheet for Bra002841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17397	Canola	cytosol	99.04	87.06
CDY51966	Canola	cytosol	97.71	85.88
AT5G56160.1	Thale cress	cytosol	80.5	72.96
Zm00001d039981_P001	Maize	cytosol	14.72	62.6
HORVU1Hr1G088100.1	Barley	cytosol	17.78	57.76
Zm00001d031251_P001	Maize	cytosol, mitochondrion	13.96	56.59
HORVU7Hr1G037200.1	Barley	nucleus	21.8	53.27
HORVU3Hr1G112740.3	Barley	nucleus	21.99	51.34
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	21.61	50.45
Zm00001d012531_P001	Maize	mitochondrion	12.62	50.38
Bra028944.1-P	Field mustard	plastid	61.95	46.55
Bra030841.1-P	Field mustard	nucleus	51.63	45.08
GSMUA_Achr4P09770_001	Banana	cytosol	34.99	40.13
Zm00001d043774_P001	Maize	cytosol	6.5	40.0
Bra030295.1-P	Field mustard	cytosol	21.03	38.87
GSMUA_Achr7P06190_001	Banana	cytosol	42.64	38.65
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	42.45	36.39
HORVU6Hr1G071770.19	Barley	cytosol	42.83	36.25
Zm00001d045670_P001	Maize	cytosol	13.0	36.17
TraesCS6D01G265200.1	Wheat	cytosol	42.64	36.03
TraesCS6A01G284800.1	Wheat	cytosol	42.64	35.97
TraesCS6B01G313500.1	Wheat	cytosol	42.45	35.86
GSMUA_Achr3P04130_001	Banana	nucleus	42.64	35.79
GSMUA_Achr5P04200_001	Banana	plastid	42.64	35.68
KXG30865	Sorghum	cytosol	42.06	35.66
Os02t0721800-01	Rice	cytosol	41.68	35.62
Os08t0341700-01	Rice	nucleus	43.21	35.48
KXG40069	Sorghum	nucleus	42.64	35.4
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	32.89	35.25
Bra011544.1-P	Field mustard	cytosol, plastid	33.27	35.15
Zm00001d017876_P018	Maize	cytosol	41.11	34.85
TraesCS2B01G533900.1	Wheat	nucleus	41.87	34.76
EER96946	Sorghum	cytosol, nucleus, plastid	39.77	34.72
TraesCS7D01G238000.2	Wheat	cytosol	40.15	34.71
Os08t0497300-01	Rice	cytosol, plastid	39.96	34.6
TraesCS2D01G506400.1	Wheat	nucleus	41.87	34.6
Os09t0481100-01	Rice	nucleus	40.34	34.53
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	43.4	34.39
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	19.5	34.34
Zm00001d051674_P037	Maize	cytosol	40.15	34.31
OQU80990	Sorghum	cytosol	39.77	34.27
Bra017663.1-P	Field mustard	cytosol, plastid	29.83	34.21
Bra024938.1-P	Field mustard	cytosol	26.0	33.83
Bra010699.1-P	Field mustard	cytosol	34.23	33.33
HORVU1Hr1G091860.1	Barley	cytosol	10.32	33.13
Zm00001d005995_P003	Maize	nucleus	37.67	32.89
Bra034638.1-P	Field mustard	cytosol	34.03	32.72
HORVU7Hr1G048880.11	Barley	mitochondrion	39.96	32.3
Zm00001d031316_P020	Maize	cytosol	39.77	32.25
Bra025754.1-P	Field mustard	nucleus	37.09	31.8
Bra010700.1-P	Field mustard	cytosol	37.48	31.72
Bra015089.1-P	Field mustard	cytosol	32.31	31.59
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	39.96	31.15
TraesCS7B01G135600.2	Wheat	plastid	39.39	30.88
Bra031196.1-P	Field mustard	cytosol	36.9	30.54
Bra003757.1-P	Field mustard	cytosol	36.52	30.22
Zm00001d050131_P002	Maize	cytosol	36.52	29.89
Zm00001d052840_P016	Maize	plastid	40.34	29.1
Zm00001d037983_P001	Maize	cytosol	12.24	27.12
Bra038012.1-P	Field mustard	cytosol	50.48	24.95
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	9.18	24.24
Zm00001d045718_P001	Maize	cytosol	11.66	24.11
Zm00001d010393_P001	Maize	plastid	16.06	23.08
Bra038021.1-P	Field mustard	cytosol	12.81	20.49
Bra030831.1-P	Field mustard	cytosol	12.05	19.38
Bra017468.1-P	Field mustard	cytosol	12.24	19.22
Bra022153.1-P	Field mustard	cytosol	12.05	19.03
Bra024920.1-P	Field mustard	cytosol	11.85	18.56
Zm00001d014589_P001	Maize	cytosol	2.68	14.43
Bra013077.1-P	Field mustard	cytosol, plastid	33.84	12.13
Zm00001d005778_P001	Maize	plastid	6.31	11.74
Zm00001d047488_P001	Maize	nucleus	3.06	10.0
Zm00001d035370_P003	Maize	plastid	7.65	9.8
Bra002840.1-P	Field mustard	cytosol	0.38	2.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra002841	EnsemblPlants:Bra002841.1	EnsemblPlants:Bra002841.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001251	InterPro:IPR036865	UniProt:M4CF59	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF84	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0002544855
SEG:seg	:	:	:	:	:

Description

AT5G56160 (E=2e-151) | transporter

Coordinates

chrA10:+:7199179..7202006

Molecular Weight (calculated)

60344.5 Da

IEP (calculated)

8.040

GRAVY (calculated)

-0.567

Length

523 amino acids

Sequence
(BLAST)

001: MSGREQTRDK LSDSECTEDE PRRSRIGNLR KKAISCSSKL THPLKRKGKR KIDYSVPFIE DVRDENEEKI VLKLRQELLN KDLLPSRHDD YHMLLRFLKT
101: MEFSIEKTVT AWEQMLKWRK EFGADRIIHE FNFKELDKVV RHYPQGYHGV DKDGRPIYIE RLGKAHPGKL MDVTTIERYL KYHVQEFERA LQEKLPACSI
201: AAKRRVTTTT TILDVEGLGM KNFSPTAANL LASIAKVDCN YYPETLHRMF IVNAGIGFRT LLWPAAQKLL DPMTIAKIQV LEPKSLSKLH EAIDSSSWQE
301: TLKEEPDSEE YYHSTGSRSP MHTCFVSPHS DKASTSDGDK IITTVESIEP AQGELSQPQS LNTDTESSSS ATTSRREGGQ VSRYSALREK IKGENIVHLV
401: KILVAFPLMK LFALFAFLLH GYWQRQNYVP VLHDSSINNE MILQCLERLK KLEKDFTETS RIPLKIPEAN EKLLTESLER IKSLELDLDK TKSVLHITLT
501: KQLQITEEIE SRYQEEQINR CCF

Best Arabidopsis Sequence Match ( AT5G56160.1 )
(BLAST)

001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF

Arabidopsis Description

SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.