Factsheet for Bra030294.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15887	Canola	cytosol	99.59	88.52
CDX99586	Canola	cytosol	98.98	87.82
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	87.91	78.28
Bra010699.1-P	Field mustard	cytosol	69.06	62.76
Bra011544.1-P	Field mustard	cytosol, plastid	59.84	58.99
Bra017663.1-P	Field mustard	cytosol, plastid	53.28	57.02
Bra034638.1-P	Field mustard	cytosol	60.45	54.23
KRH51503	Soybean	cytosol	63.32	53.93
KRH60806	Soybean	cytosol	62.3	53.15
KRH29420	Soybean	cytosol, nucleus, plastid	61.07	52.93
PGSC0003DMT400043532	Potato	cytosol	58.81	51.53
Bra030295.1-P	Field mustard	cytosol	29.51	50.88
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	59.43	50.52
Solyc10g053900.1.1	Tomato	cytosol, plastid	58.81	50.44
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	58.81	50.0
KRH24439	Soybean	plastid	33.61	50.0
PGSC0003DMT400021690	Potato	nucleus	59.02	47.68
Solyc11g040280.1.1	Tomato	cytosol	58.2	47.49
GSMUA_Achr5P23630_001	Banana	cytosol	57.38	46.51
GSMUA_Achr6P03210_001	Banana	cytosol	56.56	46.46
TraesCS2D01G335700.2	Wheat	nucleus	55.94	46.19
HORVU2Hr1G082530.1	Barley	cytosol	54.51	45.94
TraesCS2A01G327200.2	Wheat	nucleus	55.53	45.85
TraesCS2B01G354800.2	Wheat	nucleus	55.12	45.52
Os10t0122600-01	Rice	cytosol, nucleus, plastid	55.33	45.15
Os02t0440900-00	Rice	cytosol	54.92	44.82
Zm00001d016601_P006	Maize	cytosol	54.92	44.3
OQU85018	Sorghum	nucleus	55.53	44.21
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	57.38	42.42
Bra010700.1-P	Field mustard	cytosol	53.28	42.07
OQU84321	Sorghum	cytosol	48.57	42.02
TraesCS6A01G097200.1	Wheat	plastid	50.61	40.29
TraesCS6D01G085200.1	Wheat	plastid	50.61	40.16
Bra031196.1-P	Field mustard	cytosol	51.64	39.87
TraesCS6B01G125700.1	Wheat	plastid	50.2	39.84
HORVU6Hr1G017580.5	Barley	plastid	50.2	39.01
Os02t0133200-01	Rice	plasma membrane	50.0	38.61
Zm00001d015175_P002	Maize	plastid	50.2	37.98
Bra025754.1-P	Field mustard	nucleus	45.7	36.56
Bra003757.1-P	Field mustard	cytosol	47.34	36.55
Bra002841.1-P	Field mustard	cytosol	35.25	32.89
Bra030841.1-P	Field mustard	nucleus	38.93	31.72
Bra024938.1-P	Field mustard	cytosol	26.02	31.59
Bra015089.1-P	Field mustard	cytosol	32.58	29.72
Bra028944.1-P	Field mustard	plastid	33.2	23.28
Bra022153.1-P	Field mustard	cytosol	14.14	20.85
Bra038021.1-P	Field mustard	cytosol	13.93	20.8
Bra017468.1-P	Field mustard	cytosol	13.73	20.12
Bra024920.1-P	Field mustard	cytosol	13.73	20.06
Bra030831.1-P	Field mustard	cytosol	13.32	20.0
Bra013077.1-P	Field mustard	cytosol, plastid	55.12	18.44
Bra038012.1-P	Field mustard	cytosol	39.34	18.15
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra030294	EnsemblPlants:Bra030294.1	EnsemblPlants:Bra030294.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0000003
GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	InterPro:IPR001251	InterPro:IPR036865
UniProt:M4ENC4	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF144
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002543E13	SEG:seg

Description

AT2G21540 (E=1e-140) ATSFH3, SFH3 | SFH3 (SEC14-LIKE 3); phosphatidylinositol transporter

Coordinates

chrA04:-:9299211..9301959

Molecular Weight (calculated)

55971.4 Da

IEP (calculated)

9.236

GRAVY (calculated)

-0.560

Length

488 amino acids

Sequence
(BLAST)

001: MADTMSAHMD RHNKPEDDKK TKLCSFKKKA INASNKFKHS FTKKTRRNSR VMSVSIVDDI DVEELQAVDA FRQALILDEL LPSRHDDHHM MLRFLRARKF
101: DIEKAKQMWC DMINWRKEFG TDAIMEDFDF KEIDEVIKYY PQGYHGVDKE GRPIYIERLG QVDATKLMQV TTIDRYVSYH VREFEKAFNI KLPACSIAAK
201: RHIDQSTTIL DVQGVGLKNF SKAARDLLQR IQKIDSDNYP ESLNRMFIIN AGSGFRLLWS TVKSFLDPKT TAKIHMVQNG EGKCPRKTLS NIEEKTISVY
301: ESTTEKNTFN AENEKFTPIV DKTVDASSTW PTTLHKATFT EPEDLYSAVK PSERKGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGAAEKGE
401: TAMVSTQEYM SMVKRMAELE EKCRSLDNQP APFSAEKEQI LNAALTRVDQ LEFQLSETKK TLDEAMAKQL EIVAYIEKKK KKKKFFGF

Best Arabidopsis Sequence Match ( AT2G21540.3 )
(BLAST)

001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF

Arabidopsis Description

SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.