Factsheet for Bra024938.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17730	Canola	cytosol	100.0	100.0
AT5G47510.4	Thale cress	cytosol	77.11	82.23
Zm00001d019582_P001	Maize	cytosol	42.04	52.81
Os07t0456500-01	Rice	cytosol	29.1	49.37
TraesCS2D01G500100.2	Wheat	mitochondrion	44.53	45.78
HORVU2Hr1G111160.14	Barley	mitochondrion	44.78	45.69
TraesCS2A01G499900.1	Wheat	mitochondrion	44.53	45.55
TraesCS2B01G527900.2	Wheat	mitochondrion	44.53	45.43
Bra030295.1-P	Field mustard	cytosol	31.09	44.17
KRH77370	Soybean	cytosol	49.75	43.2
VIT_02s0154g00510.t01	Wine grape	cytosol	41.29	43.12
KRH28067	Soybean	cytosol	49.01	42.83
OQU88968	Sorghum	cytosol	43.53	42.58
GSMUA_AchrUn_...	Banana	mitochondrion	38.31	41.51
Solyc08g078680.2.1	Tomato	cytosol	49.25	41.25
Bra010699.1-P	Field mustard	cytosol	39.3	29.42
Bra034638.1-P	Field mustard	cytosol	39.8	29.41
Bra011544.1-P	Field mustard	cytosol, plastid	34.33	27.88
Bra017663.1-P	Field mustard	cytosol, plastid	30.85	27.19
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	31.59	26.02
Bra002841.1-P	Field mustard	cytosol	33.83	26.0
Bra025754.1-P	Field mustard	nucleus	38.31	25.25
Bra031196.1-P	Field mustard	cytosol	39.55	25.16
Bra010700.1-P	Field mustard	cytosol	38.56	25.08
Bra003757.1-P	Field mustard	cytosol	37.81	24.05
Bra022153.1-P	Field mustard	cytosol	19.65	23.87
Bra017468.1-P	Field mustard	cytosol	19.15	23.12
Bra038021.1-P	Field mustard	cytosol	18.41	22.63
Bra024920.1-P	Field mustard	cytosol	18.66	22.46
Bra030831.1-P	Field mustard	cytosol	17.91	22.15
Bra030841.1-P	Field mustard	nucleus	32.59	21.87
Bra015089.1-P	Field mustard	cytosol	26.37	19.81
Bra028944.1-P	Field mustard	plastid	30.1	17.39
Bra038012.1-P	Field mustard	cytosol	38.06	14.46
Bra013077.1-P	Field mustard	cytosol, plastid	38.81	10.69
Bra002840.1-P	Field mustard	cytosol	0.5	2.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra024938	EnsemblPlants:Bra024938.1	EnsemblPlants:Bra024938.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	UniProt:M4E832	PFAM:PF00650	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF63	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000253FA8B

Description

AT5G47510 (E=2e-176) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA06:-:24310606..24312643

Molecular Weight (calculated)

45677.4 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.587

Length

402 amino acids

Sequence
(BLAST)

001: MQETEVSVRD IHISDGSEEE DSMHEQQNSN NEQMVEAFRN LLLLHGQLPA KHGDSNTLLR FLKMRDFDLG KAKDAFLSYM KWRVDSKVDL ISKEFKYEEY
101: GEVKKHYPHG FHKVDKSGRP IYIERLGMVD LNAFSKATTI ERYVKYHIKE QEKTLSLRYP ACSIASEKHV SSTTTILDVS GLGMSNFSKS ARSLFMEIQK
201: IDSNYYPETL HRLFVVNANS GFRMLWLALK TFLDARTLAK VQVLGPNYLG ELLEAIDPSN LPTFLGGNCT CSDRGGCLFS DEGPWNDPNI KAKIQETFTM
301: GDADSEEHTM DKVSENASTN QKEDSGKNMI TLKKYASLRD AVKEAQKRIE MLEMSLHETK RAMNGLAEII ETIKPNQTET TNSQMQTGLD RKPIVRKMSG
401: LS

Best Arabidopsis Sequence Match ( AT5G47510.4 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.