Factsheet for GSMUA_AchrUn_randomP09000_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019582_P001	Maize	cytosol	49.6	57.5
Os07t0456500-01	Rice	cytosol	34.5	54.01
TraesCS2B01G527900.2	Wheat	mitochondrion	53.64	50.51
TraesCS2D01G500100.2	Wheat	mitochondrion	53.1	50.38
HORVU2Hr1G111160.14	Barley	mitochondrion	52.83	49.75
TraesCS2A01G499900.1	Wheat	mitochondrion	52.56	49.62
OQU88968	Sorghum	cytosol	52.56	47.45
AT5G47510.4	Thale cress	cytosol	40.43	39.79
KRH77370	Soybean	cytosol	49.6	39.74
KRH28067	Soybean	cytosol	48.79	39.35
CDX77773	Canola	cytosol	42.59	38.82
GSMUA_Achr3P28830_001	Banana	nucleus	27.49	38.49
Bra024938.1-P	Field mustard	cytosol	41.51	38.31
CDY17730	Canola	cytosol	41.51	38.31
VIT_02s0154g00510.t01	Wine grape	cytosol	38.54	37.14
GSMUA_Achr9P01730_001	Banana	plastid	33.96	36.52
Solyc08g078680.2.1	Tomato	cytosol	47.17	36.46
GSMUA_Achr4P09770_001	Banana	cytosol	41.51	33.77
GSMUA_Achr6P06610_001	Banana	mitochondrion	31.81	27.13
GSMUA_Achr7P06190_001	Banana	cytosol	41.78	26.86
GSMUA_Achr10P...	Banana	cytosol	40.16	26.7
GSMUA_Achr3P04130_001	Banana	nucleus	44.74	26.65
GSMUA_Achr5P04200_001	Banana	plastid	43.94	26.08
GSMUA_Achr9P22020_001	Banana	cytosol	43.94	25.83
GSMUA_Achr6P03210_001	Banana	cytosol	41.24	25.76
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	41.24	25.08
GSMUA_Achr1P12050_001	Banana	cytosol	42.05	24.92
GSMUA_Achr5P23630_001	Banana	cytosol	40.43	24.92
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	43.94	24.7
GSMUA_Achr2P09690_001	Banana	cytosol	40.7	24.12
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	40.7	22.88
GSMUA_Achr1P25320_001	Banana	cytosol	39.08	22.17
GSMUA_Achr3P28070_001	Banana	cytosol	19.41	21.43
GSMUA_Achr7P06060_001	Banana	cytosol	18.33	20.42
GSMUA_Achr3P12050_001	Banana	cytosol	18.33	20.36
GSMUA_Achr1P09480_001	Banana	cytosol	18.33	20.3
GSMUA_Achr1P19200_001	Banana	cytosol	18.33	20.18
GSMUA_Achr4P13090_001	Banana	cytosol	17.79	19.64
GSMUA_Achr3P28840_001	Banana	mitochondrion	15.36	15.49

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_AchrUn_randomG09000_001	EnsemblPlants:GSMUA_AchrUn_randomP09000_001
EnsemblPlants:GSMUA_AchrUn_randomT09000_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0U7L0	PFAM:PF00650	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF63	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TMHMM:TMhelix	UniParc:UPI0002950987	:	:	:	:

Description

Putative SEC14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09000_001]

Coordinates

chrchrUn_random:-:41823792..41827003

Molecular Weight (calculated)

42648.6 Da

IEP (calculated)

8.136

GRAVY (calculated)

-0.185

Length

371 amino acids

Sequence
(BLAST)

001: MSFRSLQKSL TKITKSDTFR TIFQGVRDPE EVKQVQSLRD LLASTGQLPE KHDDYHTLLR FLRMRNFDLA QTRIMFVNML KWREDNRVDV IAREFEFEEY
101: DAVQQCYPRG YHGVDNVGRP LYIERIGSID FNTLLTVTTV DRFVKHHVVE QEKTLNLRFP ACSLAAKRHI ASITAILDVE GLGIKNFSKP AREIFTEIQK
201: IDSNYYPETL NQLYIINAGP GFKALWNILR AFLEPRTLSK VQVLGTSFIS KLSEAVDLSN IPEFFGGKCK CVEHGGCLRK DKGPWTDPEI KSKLMVKFPC
301: CPYMIPLICY LAILSSSVIF FLQEVFYKAQ KLEDEPTDEN IFKELSKSQV VTSLAPSSST NVVYEFFLSC K

Best Arabidopsis Sequence Match ( AT5G47510.2 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKV KSRII

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.