Factsheet for GSMUA_Achr6P06610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01730_001	Banana	plastid	56.09	70.72
GSMUA_Achr3P28830_001	Banana	nucleus	28.74	47.17
GSMUA_Achr4P09770_001	Banana	cytosol	39.77	37.94
GSMUA_AchrUn_...	Banana	mitochondrion	27.13	31.81
KRG99773	Soybean	cytosol, nucleus, plastid	42.76	31.31
AT3G24840.3	Thale cress	cytosol	41.15	30.86
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	42.99	30.61
CDY52084	Canola	cytosol	41.15	30.49
KRH46724	Soybean	cytosol, nucleus, plastid	41.38	30.3
GSMUA_Achr7P06190_001	Banana	cytosol	40.0	30.16
CDX77382	Canola	cytosol	41.84	29.4
Solyc09g060090.2.1	Tomato	cytosol	40.0	29.34
GSMUA_Achr10P...	Banana	cytosol	37.47	29.21
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	40.92	29.18
PGSC0003DMT400045517	Potato	cytosol	39.77	29.17
GSMUA_Achr1P12050_001	Banana	cytosol	40.69	28.27
GSMUA_Achr3P04130_001	Banana	nucleus	40.0	27.93
GSMUA_Achr5P04200_001	Banana	plastid	40.0	27.84
GSMUA_Achr2P09690_001	Banana	cytosol	40.0	27.8
GSMUA_Achr6P03210_001	Banana	cytosol	37.7	27.61
GSMUA_Achr5P23630_001	Banana	cytosol	37.47	27.08
Bra015089.1-P	Field mustard	cytosol	33.1	26.92
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	40.23	26.52
GSMUA_Achr9P22020_001	Banana	cytosol	38.39	26.47
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	38.62	25.45
GSMUA_Achr1P25320_001	Banana	cytosol	36.78	24.46
GSMUA_Achr7P06060_001	Banana	cytosol	18.16	23.72
GSMUA_Achr3P12050_001	Banana	cytosol	18.16	23.65
GSMUA_Achr1P19200_001	Banana	cytosol	17.7	22.85
GSMUA_Achr1P09480_001	Banana	cytosol	16.55	21.49
GSMUA_Achr3P28070_001	Banana	cytosol	16.55	21.43
GSMUA_Achr4P13090_001	Banana	cytosol	16.09	20.83
GSMUA_Achr3P28840_001	Banana	mitochondrion	10.11	11.96

Protein Annotations

EnsemblPlants:GSMUA_Achr6P06610_001	EnsemblPlants:GSMUA_Achr6T06610_001	EnsemblPlantsGene:GSMUA_Achr6G06610_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF100
PFAM:PF00650	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0002953A62	UniProt:M0T4Q9	MapMan:35.1	:	:

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr6G06610_001]

Coordinates

chr6:-:4453637..4458207

Molecular Weight (calculated)

49313.0 Da

IEP (calculated)

7.771

GRAVY (calculated)

-0.282

Length

435 amino acids

Sequence
(BLAST)

001: MVPFTVRVLF PPFGTTRIGI QRRANWRHLS LSTCLARPSV PFSPLTASHD PHQFNSEENI FATSLPPSLS ILFGGTRGET QGNWNYRERR GEADDDIDMI
101: SSFSRTGASE GARRRGKWKK ADPQAVATVA EDRMDASEEE AIVEAFRKVL IDRNLLPPCH DDYHTMLRFL KARGLNIEKA TRMWSEMLQW RKDFGADTIL
201: QNQEFMLCFY YSIFLSFLLL KNQFSSNTEF KPDFVYDELE KVLQYYPHGF HGVDKDGRPI YIERLGKVDP NKLLSVTTVE RFVRYHVQGI EKVLTEKYPA
301: CSVAAKRHVD TMTTVLDAQG VNWMSVGKLA RDVVLRIQKV DSDNYPEVIY VLFIVNAGSG CRLLWNTIKG IIDPRTSAKI VVLGDTYQNT LLESIEMSQL
401: PAFLGGSCTC SNEGGCLTSN KGPWSDPQII SVRTI

Best Arabidopsis Sequence Match ( AT3G24840.1 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.