Factsheet for GSMUA_Achr3P28830_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030295.1-P	Field mustard	cytosol	44.15	41.34
CDY15888	Canola	cytosol	44.15	41.34
CDX99587	Canola	cytosol, mitochondrion	43.4	40.64
GSMUA_Achr9P22020_001	Banana	cytosol	93.21	39.14
GSMUA_Achr4P09770_001	Banana	cytosol	64.53	37.5
GSMUA_Achr1P12050_001	Banana	cytosol	84.53	35.78
CDX82040	Canola	cytosol	81.13	35.66
GSMUA_Achr2P09690_001	Banana	cytosol	82.26	34.82
GSMUA_Achr9P01730_001	Banana	plastid	44.91	34.49
CDY13810	Canola	cytosol	80.75	33.86
KRH60804	Soybean	cytosol	79.62	33.81
VIT_03s0038g04470.t01	Wine grape	cytosol	79.62	33.76
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	78.11	33.71
CDY12125	Canola	cytosol	77.74	33.44
PGSC0003DMT400001942	Potato	cytosol	78.87	33.44
Solyc01g109870.2.1	Tomato	cytosol	78.87	33.44
CDX90316	Canola	cytosol	76.98	33.01
Bra010700.1-P	Field mustard	cytosol	76.98	33.01
KRH29416	Soybean	cytosol	78.11	32.91
KRH24438	Soybean	cytosol	78.11	32.91
AT2G21520.3	Thale cress	cytosol	78.87	32.81
Os05t0545000-01	Rice	cytosol, nucleus, plastid	75.47	32.63
Solyc10g053970.1.1	Tomato	cytosol	76.6	32.58
Bra031196.1-P	Field mustard	cytosol	77.36	32.44
PGSC0003DMT400043545	Potato	cytosol	76.23	31.42
KRH51499	Soybean	cytosol	74.34	30.73
KXG22454	Sorghum	cytosol	71.7	30.69
Zm00001d009439_P004	Maize	cytosol	71.32	30.58
Zm00001d038880_P001	Maize	cytosol	70.57	30.26
KXG33199	Sorghum	cytosol	69.06	30.25
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	70.57	30.11
TraesCS3D01G255900.4	Wheat	cytosol	69.81	30.08
GSMUA_Achr6P03210_001	Banana	cytosol	67.17	29.97
GSMUA_Achr5P23630_001	Banana	cytosol	66.79	29.4
TraesCS3B01G287000.6	Wheat	cytosol	70.57	29.31
GSMUA_Achr7P06190_001	Banana	cytosol	63.77	29.29
Zm00001d011663_P003	Maize	cytosol	67.17	28.99
TraesCS3A01G255000.6	Wheat	cytosol	69.43	28.84
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	71.7	28.79
GSMUA_Achr6P06610_001	Banana	mitochondrion	47.17	28.74
GSMUA_Achr1P25320_001	Banana	cytosol	69.81	28.29
Zm00001d043733_P002	Maize	mitochondrion	58.11	28.05
GSMUA_Achr10P...	Banana	cytosol	58.87	27.96
GSMUA_Achr3P04130_001	Banana	nucleus	65.66	27.93
GSMUA_Achr5P04200_001	Banana	plastid	65.66	27.84
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	70.19	27.8
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	63.77	27.7
GSMUA_AchrUn_...	Banana	mitochondrion	38.49	27.49
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	67.55	27.12
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	70.94	26.33
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	70.57	26.26
Os01t0701900-01	Rice	nucleus	65.28	25.78
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	70.19	25.51
GSMUA_Achr3P12050_001	Banana	cytosol	20.75	16.47
GSMUA_Achr1P19200_001	Banana	cytosol	20.75	16.32
GSMUA_Achr7P06060_001	Banana	cytosol	20.0	15.92
GSMUA_Achr4P13090_001	Banana	cytosol	20.0	15.77
GSMUA_Achr1P09480_001	Banana	cytosol	19.25	15.22
GSMUA_Achr3P28070_001	Banana	cytosol	19.25	15.18
GSMUA_Achr3P28840_001	Banana	mitochondrion	0.75	0.54

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GSMUA_Achr3G28830_001	EnsemblPlants:GSMUA_Achr3P28830_001	EnsemblPlants:GSMUA_Achr3T28830_001	InterPro:IPR001251	InterPro:IPR036865
UniProt:M0SIP9	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000294A1DC	SEG:seg

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G28830_001]

Coordinates

chr3:+:28238157..28243298

Molecular Weight (calculated)

31255.2 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.805

Length

265 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGSSNHD EKKERKSDVE NSEDERRTRI GSLKKKAISA STKFRHSLRR KSRKKHDTRV SSVSIEDIRD IEELQAVDAF RQSLMQDELL
101: PSKHDDYHMM LRFLKARKFD LEKAKHMWSE MLTWRQEFGV DTIVEDFDYT EIEEVLKYYP QGYHGVDKEG RPVYIERLGK VDANKLMQVT TMERYVKYHV
201: KEFERCFLFR FPACSIAAKR HIDSSTTILD VQGVGLKNFT KAARELIIRL QKIDNDNYPE ECDLS

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.