Factsheet for HORVU1Hr1G078880.9

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	83.26	97.75
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	87.65	89.5
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	87.11	89.19
Os05t0545000-01	Rice	cytosol, nucleus, plastid	70.51	83.85
KXG22454	Sorghum	cytosol	68.31	80.45
Zm00001d009439_P004	Maize	cytosol	67.49	79.61
Zm00001d038880_P001	Maize	cytosol	67.35	79.45
GSMUA_Achr3P28830_001	Banana	nucleus	25.51	70.19
Bra030295.1-P	Field mustard	cytosol	25.1	64.66
CDY15888	Canola	cytosol	25.1	64.66
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	58.44	63.68
CDX99587	Canola	cytosol, mitochondrion	24.69	63.6
GSMUA_Achr9P22020_001	Banana	cytosol	54.6	63.07
KRH29416	Soybean	cytosol	50.89	58.98
KRH24438	Soybean	cytosol	50.48	58.51
KRH60804	Soybean	cytosol	50.07	58.49
VIT_03s0038g04470.t01	Wine grape	cytosol	49.93	58.24
GSMUA_Achr3P28840_001	Banana	mitochondrion	29.08	57.61
Solyc01g109870.2.1	Tomato	cytosol	49.25	57.44
PGSC0003DMT400001942	Potato	cytosol	49.11	57.28
HORVU1Hr1G088100.1	Barley	cytosol	12.48	56.52
CDX82040	Canola	cytosol	46.5	56.22
CDY13810	Canola	cytosol	48.7	56.17
AT2G21520.3	Thale cress	cytosol	48.83	55.89
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	47.05	55.86
CDY12125	Canola	cytosol	47.05	55.68
Bra010700.1-P	Field mustard	cytosol	47.19	55.66
CDX90316	Canola	cytosol	47.19	55.66
KRH51499	Soybean	cytosol	48.56	55.23
Bra031196.1-P	Field mustard	cytosol	47.6	54.91
Solyc10g053970.1.1	Tomato	cytosol	46.91	54.9
PGSC0003DMT400043545	Potato	cytosol	47.46	53.81
HORVU7Hr1G037200.1	Barley	nucleus	15.36	52.34
HORVU3Hr1G112740.3	Barley	nucleus	15.36	50.0
GSMUA_Achr1P25320_001	Banana	cytosol	44.31	49.39
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	15.09	49.11
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	49.93	48.86
HORVU2Hr1G082530.1	Barley	cytosol	36.63	46.11
HORVU6Hr1G071770.19	Barley	cytosol	37.04	43.69
HORVU6Hr1G017580.5	Barley	plastid	35.67	41.4
HORVU7Hr1G048880.11	Barley	mitochondrion	36.49	41.11
HORVU1Hr1G091860.1	Barley	cytosol	8.64	38.65
HORVU2Hr1G111160.14	Barley	mitochondrion	20.44	37.82
HORVU5Hr1G052230.2	Barley	cytosol	11.8	25.6
HORVU7Hr1G090330.11	Barley	cytosol, nucleus, plastid	11.52	24.71
HORVU6Hr1G032510.1	Barley	cytosol, nucleus, peroxisome	11.39	24.13

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A287GDW3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU1Hr1G078880	EnsemblPlants:HORVU1Hr1G078880.9	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000B47CEC3	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:521283938..521292814

Molecular Weight (calculated)

82740.1 Da

IEP (calculated)

8.766

GRAVY (calculated)

-0.532

Length

729 amino acids

Sequence
(BLAST)

001: PPAPLKRWEK EKLLLLPPPE IRTRIPKLTG GKSPPGTRFP AWYARVRTVI RLIQVLLPPP LIQFANPAFE RAWRALFAAV LLAEFFRADF PADFGPGALL
101: GRSIPEPEGM SGPLDRLARP SFEGFTHNDG KKESRSDADN SEGEKKTKIA SFKKKAINAG NKFRHSLRRR SKKKNENQIS IEDIRHVQDL QAVEAFRQCL
201: LDEDLLPQQH DDYHMMLRFL KARKFDVEKA KLMWSDMLAW RKEFGTDNIE EFDYSELNEV MQYYPQFYHG VDKDGRPVYV ELIGKVDANK LVQVTTIDRY
301: VKYHVKEFEK CFQMRFPACS IAAKRHLDSC TTILDVQGVG LKNFAKCARE LITRLQKIDS DNYPETLCRM YIINAGQGFK MLWGTIKSFL DPKTASKIHV
401: LGTKYQNKLL EIIDESELPE FFGGKCKCEE HGGCQRSDKG PWKDPTTIKR VLNGEANYDR QIVTISGTDG KIIGYARPQR PNGKGSDASA ESGSEVEDAT
501: SPTAPRTLIT NPSLTPVHEE SKFAAHASTS AARPTIEESI PVVDKVVDDG WSSPRASPTS SSSGSLSLRN LPTTFEGIRT LAVAWLTVFI VTLFAMLRSI
601: PSRMAKRLSN QSNDHDHYYV DCPQEQEHKE EFRPPSPAPS YTEKEILSTL VRRLGELEEK VQALEAKPSE MPFEKEELLN ASARRVDALE ADLISTKKAL
701: YEALMRQDEL LAFIDKQDML KFRKKKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.