Factsheet for TraesCS1B01G384500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	97.75	85.25
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	97.75	85.01
Os05t0545000-01	Rice	cytosol, nucleus, plastid	82.77	83.85
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	97.75	83.26
KXG22454	Sorghum	cytosol	79.87	80.13
Zm00001d009439_P004	Maize	cytosol	79.07	79.45
Zm00001d038880_P001	Maize	cytosol	78.42	78.8
GSMUA_Achr3P28830_001	Banana	nucleus	30.11	70.57
TraesCS3B01G287000.6	Wheat	cytosol	68.12	66.3
CDY15888	Canola	cytosol	29.31	64.31
Bra030295.1-P	Field mustard	cytosol	29.31	64.31
CDX99587	Canola	cytosol, mitochondrion	28.82	63.25
GSMUA_Achr9P22020_001	Banana	cytosol	64.25	63.23
KRH29416	Soybean	cytosol	60.06	59.3
KRH24438	Soybean	cytosol	59.74	58.98
VIT_03s0038g04470.t01	Wine grape	cytosol	59.1	58.72
KRH60804	Soybean	cytosol	58.78	58.49
Solyc01g109870.2.1	Tomato	cytosol	58.29	57.92
GSMUA_Achr3P28840_001	Banana	mitochondrion	34.3	57.88
PGSC0003DMT400001942	Potato	cytosol	58.13	57.76
CDY13810	Canola	cytosol	57.81	56.8
CDX82040	Canola	cytosol	55.07	56.72
AT2G21520.3	Thale cress	cytosol	57.97	56.51
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	57.33	56.51
CDY12125	Canola	cytosol	56.04	56.49
Bra010700.1-P	Field mustard	cytosol	56.2	56.47
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	55.72	56.35
CDX90316	Canola	cytosol	56.04	56.31
Bra031196.1-P	Field mustard	cytosol	56.52	55.54
KRH51499	Soybean	cytosol	57.0	55.23
Solyc10g053970.1.1	Tomato	cytosol	55.39	55.22
PGSC0003DMT400043545	Potato	cytosol	56.04	54.12
GSMUA_Achr1P25320_001	Banana	cytosol	51.69	49.08
TraesCS2B01G354800.2	Wheat	nucleus	43.32	45.52
TraesCS2B01G533900.1	Wheat	nucleus	45.57	44.92
TraesCS6B01G313500.1	Wheat	cytosol	43.16	43.3
TraesCS6B01G125700.1	Wheat	plastid	42.19	42.6
TraesCS7B01G135600.2	Wheat	plastid	42.35	39.43
TraesCS2B01G527900.2	Wheat	mitochondrion	24.32	38.32
TraesCS6B01G188100.1	Wheat	cytosol	13.37	25.38
TraesCS7B01G280200.2	Wheat	cytosol	13.2	25.23
TraesCS5B01G166800.1	Wheat	cytosol	13.53	25.07

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G384500	EnsemblPlants:TraesCS1B01G384500.1	TIGR:cd00170
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:617816975..617823456

Molecular Weight (calculated)

70789.3 Da

IEP (calculated)

8.091

GRAVY (calculated)

-0.628

Length

621 amino acids

Sequence
(BLAST)

001: MSGPLDRLAR PSFEGFTHND GKKESRSDAD NSEGEKKTKI ASFKKKAINA GNKFRHSLRR RSKKKNENQI SIEDIRDVQD LQAVEAFRQC LLDEDLLPQQ
101: HDDYHMMLRF LKARKFDVEK AKLMWSDMLA WRKEFGTDNI EEFDYSELNE VMKYYPQFYH GVDKDGRPVY VELIGKVDAN KVVQVTTIDR YVKYHVKEFE
201: KCFQMRFPAC SIAAKRHLDS CTTILDVQGV GLKNFSKTAR ELITRLQKID SDNYPETLCR MYIINAGQGF KMLWGTIKSF LDPKTASKIH VLGTKYQNKL
301: LEIIDESELP EFFGGKCKCE EHGGCQRSDK GPWKDPTTIK RVLNGEANYD RQIVTISGTD GKIIGYARPQ RPNQGKGSDA SAESGSEVED ATSPTAPKTL
401: ITNPSLTPVH EESKFATHAS TSAVRPTIEE SIPVVDKVVD DGWSSPRASP VSSSSGSLSL RNLPTTFEGI RTLAVAWLTV FIVTLFAMFR SIPSRMAKRL
501: SNQSNDHDHY YVDCPQEQEY KEEFRPPSPA PAYTEKEILS TLVRRLGELE EKVQALEKKP SEMPFEKEEL LNASARRVDA LEADLISTKK ALYEALMRQD
601: ELLAFIDKQD MLKFRKKKFC F

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.