Factsheet for Zm00001d015175_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36490.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT4G36490.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84321	Sorghum	cytosol	82.02	93.79
Os02t0133200-01	Rice	plasma membrane	76.9	78.48
TraesCS6A01G097200.1	Wheat	plastid	72.4	76.18
TraesCS6B01G125700.1	Wheat	plastid	71.63	75.12
TraesCS6D01G085200.1	Wheat	plastid	71.32	74.8
HORVU6Hr1G017580.5	Barley	plastid	71.78	73.73
Zm00001d039981_P001	Maize	cytosol	12.4	65.04
Zm00001d031251_P001	Maize	cytosol, mitochondrion	11.78	58.91
KRH76738	Soybean	plastid	43.88	58.84
GSMUA_Achr6P03210_001	Banana	cytosol	54.11	58.75
GSMUA_Achr5P23630_001	Banana	cytosol	54.42	58.31
KRH28724	Soybean	plastid	43.41	57.97
AT4G36490.1	Thale cress	plastid	47.44	56.35
CDX75444	Canola	cytosol	46.2	55.81
KRH24439	Soybean	plastid	28.37	55.79
KRH08168	Soybean	plastid	47.75	55.5
CDX69071	Canola	cytosol	45.89	55.43
Zm00001d012531_P001	Maize	mitochondrion	11.16	54.96
KRH69861	Soybean	plastid	47.29	54.95
CDX89709	Canola	cytosol, mitochondrion	38.29	54.29
Zm00001d016601_P006	Maize	cytosol	50.85	54.21
Bra034638.1-P	Field mustard	cytosol	45.58	54.04
Bra011544.1-P	Field mustard	cytosol, plastid	41.4	53.94
AT4G34580.2	Thale cress	cytosol	46.2	53.79
AT2G18180.1	Thale cress	plastid	46.05	53.23
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	54.26	53.03
PGSC0003DMT400043532	Potato	cytosol	45.58	52.78
CDY45318	Canola	cytosol, plastid	40.78	52.6
KRH29420	Soybean	cytosol, nucleus, plastid	45.89	52.58
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	44.65	52.55
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	46.2	51.92
CDY17469	Canola	cytosol	45.89	51.84
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	46.05	51.74
CDY15887	Canola	cytosol	44.03	51.73
KRH51503	Soybean	cytosol	45.89	51.66
CDX99586	Canola	cytosol	44.03	51.64
KRH60806	Soybean	cytosol	45.58	51.4
Solyc10g053900.1.1	Tomato	cytosol, plastid	45.27	51.32
CDY12126	Canola	cytosol	42.48	51.22
Solyc11g040280.1.1	Tomato	cytosol	47.44	51.17
CDX90317	Canola	cytosol	42.48	51.02
Bra010699.1-P	Field mustard	cytosol	42.33	50.84
Bra017663.1-P	Field mustard	cytosol, plastid	35.81	50.66
PGSC0003DMT400021690	Potato	nucleus	47.29	50.5
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	37.98	50.2
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	41.71	50.19
AT2G16380.1	Thale cress	cytosol	42.48	50.09
CDX76291	Canola	cytosol	45.89	50.0
AT4G39180.1	Thale cress	cytosol	42.79	49.82
VIT_03s0038g04480.t01	Wine grape	cytosol	46.51	48.39
Zm00001d043774_P001	Maize	cytosol	6.36	48.24
Zm00001d045670_P001	Maize	cytosol	13.95	47.87
CDX69225	Canola	mitochondrion	43.72	46.46
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	20.62	44.78
Zm00001d015174_P005	Maize	cytosol	44.19	43.58
Zm00001d019582_P001	Maize	cytosol	21.09	42.5
Zm00001d053994_P008	Maize	cytosol, mitochondrion	43.88	42.49
Zm00001d043733_P002	Maize	mitochondrion	35.35	41.53
Zm00001d009439_P004	Maize	cytosol	39.69	41.42
Zm00001d038880_P001	Maize	cytosol	39.53	41.26
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	12.56	40.91
Zm00001d014589_P001	Maize	cytosol	6.05	40.21
Zm00001d011663_P003	Maize	cytosol	37.83	39.74
Zm00001d005995_P003	Maize	nucleus	35.35	38.06
Zm00001d017876_P018	Maize	cytosol	35.5	37.12
Zm00001d051674_P037	Maize	cytosol	35.04	36.93
Zm00001d045718_P001	Maize	cytosol	13.8	35.18
Zm00001d037983_P001	Maize	cytosol	12.87	35.17
Zm00001d031316_P020	Maize	cytosol	34.57	34.57
Zm00001d050131_P002	Maize	cytosol	30.85	31.14
Zm00001d052840_P016	Maize	plastid	34.73	30.9
Zm00001d010393_P001	Maize	plastid	16.74	29.67
Zm00001d047488_P001	Maize	nucleus	6.2	25.0
Zm00001d015785_P001	Maize	extracellular	11.32	22.32
CDY02262	Canola	cytosol, plastid	43.26	19.36
Bra013077.1-P	Field mustard	cytosol, plastid	43.26	19.12
Zm00001d053333_P001	Maize	cytosol	3.57	18.85
Zm00001d046538_P003	Maize	cytosol	11.47	18.83
Zm00001d005118_P002	Maize	cytosol	11.16	18.27
Zm00001d024390_P001	Maize	cytosol	3.57	17.97
Zm00001d015625_P001	Maize	cytosol	3.57	17.69
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	9.3	17.39
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	2.48	15.69
Zm00001d005778_P001	Maize	plastid	6.67	15.3
Zm00001d035370_P003	Maize	plastid	9.46	14.95
Zm00001d050144_P001	Maize	cytosol	3.26	12.14
Zm00001d051318_P001	Maize	cytosol	3.41	11.58
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	3.72	10.17
Zm00001d020031_P001	Maize	cytosol	2.02	8.28

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100502156	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1D6GZR6	ProteinID:AQK68224.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF55
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00084252C0	EnsemblPlantsGene:Zm00001d015175
EnsemblPlants:Zm00001d015175_P002	EnsemblPlants:Zm00001d015175_T002	SEG:seg	:	:	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH10

Coordinates

chr5:-:78399660..78402930

Molecular Weight (calculated)

71367.8 Da

IEP (calculated)

7.157

GRAVY (calculated)

-0.409

Length

645 amino acids

Sequence
(BLAST)

001: MSSAAVSGSG GAAAAADGGV EGAPALSASA SRTSSLRHRA MSASSKLLRS SLSRKSMGRR SSKVMSVSIE DVRDAEDMKQ VDAFRQTLVL EELLPARHDD
101: YHMMLRFLRA RKFDIEKSKQ MWSDMLQWRK EFGADTIIDE FVFEEMDQVL EHYPQGHHGV DKDGRPVYME KLGQIDTTKL LQVTSMDRYV QYHVREFERA
201: FAVKFPACSI SAKKHVDQST TILDVSGVGY KNFNKAARDL IGRLQKIDGD NYPETLCRMF IINAGQGFRL LWNTVKSFLD PKTTAKIHVT KPISPPPPIT
301: GIGWFHSLDH LLCSALMAVQ VLGNKYQSKL LEVIDASELP EFFGGTCNCE GGCMRSDKGP WKDPEILKMV QCGMGRCGMN SGDPRDADEK LITEDEIVPV
401: PKKQDSMRRN AVDSPKVARE KIEHPQMSPL HEMKTASDPD PAAKDSFDGG GLFPGVDRGM DFNWSGEVSE EKLQIARDMY AQLPDAYKQG DAGDRQVVSG
501: FMALVMGVVA MFRVGKIAPK RAMDAAMGIA TMEAMAKKTR QMQMQQQLQL GGPDAVVVSA AQYQALVKRV DDLEAKVAAL ASGPPEVPPE LEESIKAAAA
601: RVDALETELD ATKKLLETSS AQQEEVLAYI EKKKKKRGMQ NPFRW

Best Arabidopsis Sequence Match ( AT2G18180.1 )
(BLAST)

001: MSLNVDLDVC VLERPNVCSF KKRSCSKLSC SLTKKRRSSK VMSVEIFEDE HDAEELKVVD AFRQVLILDE LLPDKHDDYH MMLRFLKARK FDLEKTNQMW
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV

Arabidopsis Description

SFH10Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI13]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.