Factsheet for Os02t0440900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36490.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0122600-01	Rice	cytosol, nucleus, plastid	93.65	93.65
TraesCS2B01G354800.2	Wheat	nucleus	79.77	80.71
TraesCS2A01G327200.2	Wheat	nucleus	79.6	80.54
TraesCS2D01G335700.2	Wheat	nucleus	79.6	80.54
HORVU2Hr1G082530.1	Barley	cytosol	77.76	80.31
OQU85018	Sorghum	nucleus	80.1	78.14
Zm00001d016601_P006	Maize	cytosol	78.93	78.02
GSMUA_Achr5P23630_001	Banana	cytosol	64.05	63.62
GSMUA_Achr6P03210_001	Banana	cytosol	62.21	62.63
KRH76738	Soybean	plastid	47.66	59.25
KRH28724	Soybean	plastid	47.66	59.01
KRH24439	Soybean	plastid	31.61	57.62
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	52.17	56.93
CDX75444	Canola	cytosol	50.67	56.74
CDX69071	Canola	cytosol	50.33	56.37
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	61.87	56.06
AT4G36490.1	Thale cress	plastid	50.84	55.99
CDY15887	Canola	cytosol	51.34	55.92
CDY12126	Canola	cytosol	50.0	55.89
CDX99586	Canola	cytosol	51.34	55.82
CDX90317	Canola	cytosol	50.0	55.68
Bra010699.1-P	Field mustard	cytosol	49.83	55.49
KRH08168	Soybean	plastid	51.34	55.32
CDX89709	Canola	cytosol, mitochondrion	41.97	55.16
Bra034638.1-P	Field mustard	cytosol	50.17	55.15
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	44.82	54.92
AT4G39180.1	Thale cress	cytosol	50.84	54.87
KRH69861	Soybean	plastid	50.84	54.77
PGSC0003DMT400043532	Potato	cytosol	51.0	54.76
AT4G34580.2	Thale cress	cytosol	50.67	54.69
KRH51503	Soybean	cytosol	52.17	54.45
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	52.01	54.18
Bra011544.1-P	Field mustard	cytosol, plastid	44.82	54.14
Os02t0133200-01	Rice	plasma membrane	57.19	54.11
KRH29420	Soybean	cytosol, nucleus, plastid	50.84	54.0
Solyc10g053900.1.1	Tomato	cytosol, plastid	51.17	53.78
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	51.51	53.66
KRH60806	Soybean	cytosol	51.17	53.5
CDY17469	Canola	cytosol	50.67	53.06
CDY45318	Canola	cytosol, plastid	44.31	53.0
AT2G18180.1	Thale cress	plastid	48.66	52.15
Bra017663.1-P	Field mustard	cytosol, plastid	39.63	51.97
Solyc11g040280.1.1	Tomato	cytosol	51.51	51.51
PGSC0003DMT400021690	Potato	nucleus	52.01	51.49
VIT_03s0038g04480.t01	Wine grape	cytosol	53.34	51.45
AT2G16380.1	Thale cress	cytosol	46.99	51.37
CDX76291	Canola	cytosol	50.67	51.18
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	44.82	50.0
Os05t0545000-01	Rice	cytosol, nucleus, plastid	47.99	46.82
Os02t0133100-01	Rice	cytosol	32.11	45.39
CDX69225	Canola	mitochondrion	45.65	44.98
Os07t0456500-01	Rice	cytosol	17.06	43.04
Os08t0341700-01	Rice	nucleus	43.65	40.97
Os02t0721800-01	Rice	cytosol	41.64	40.69
Os08t0497300-01	Rice	cytosol, plastid	40.47	40.07
Os09t0481100-01	Rice	nucleus	39.8	38.95
Os01t0701900-01	Rice	nucleus	43.48	38.75
Os09t0258000-01	Rice	cytosol	14.88	26.57
Os02t0200000-01	Rice	cytosol	13.04	23.85
Os06t0607200-01	Rice	cytosol	4.85	20.0
CDY02262	Canola	cytosol, plastid	48.16	19.99
Bra013077.1-P	Field mustard	cytosol, plastid	48.16	19.74

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:4329236	UniProt:A0A0P0VIJ6	ProteinID:BAS78486.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	EnsemblPlantsGene:Os02g0440900	EnsemblPlants:Os02t0440900-00	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF137	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI00018C6C40	RefSeq:XP_015624069.1	SEG:seg	:	:

Description

Sec14-nodulin domain-containing protein 2, Sec14-nodulin domain protein 2Similar to predicted protein. (Os02t0440900-00)

Coordinates

chr2:+:14162331..14166278

Molecular Weight (calculated)

67406.6 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.404

Length

598 amino acids

Sequence
(BLAST)

001: MTEVLSRPLE HRLSSPTLDG HYEEKRKSNV EYSEDEKKAK IISLKKKAMS ASQKLRHSMK KGRRSSKVIS ISIADERDPE EVQAVDAFRQ LLVLEELLPS
101: HHDDYHMMLR FLKARKFDVE KAKQMWVDML QWRKEFAADT ILEDFEFEEA DKVAECYPQG YHGVDKEGRP VYIERLGQIN VNRLMQVTTM DRFIKNHVRE
201: FEKNFAVKFP ACSIAAKCHI DQSTTILDVQ GVGMKQFSKA ARDLIGQLQK IDGDNYPETL CRMFIINAGP GFRLLWSTVK SFLDPKTTAK IHVLGNKYQS
301: KLLEVIDASE LPEFFGGTCQ CEGGCMKADK GPWKDAEILK MVQSGAGWCG NLSLNHLDAE EKMMICEDDT MHTKRQESFK YEGCTLSRKI SCARIEHPSL
401: SPVCEELPPT ILPTLGSAYS CDVPMVEKAI DAICQSKGLP DENVTVTKAI VNASNGSNPP LYGGIMALVM SIATMLRVSR NMPKKVLGAT LGAQSTSKIQ
501: AQQLSEISVE AVSVAEYVSS TKRLSDIEEK VIAILTKPAE MPADKEEMLK TAVSRVSALE EELAATKKAL QETLERQEEI MAYIEKKKKK KSKRLFRW

Best Arabidopsis Sequence Match ( AT2G21540.6 )
(BLAST)

001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF

Arabidopsis Description

SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [cytosol,nucleus,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.