Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G245300.1 | Wheat | cytosol | 99.29 | 99.29 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 99.29 | 99.29 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 97.88 | 97.65 |
| Zm00001d010476_P001 | Maize | cytosol | 83.49 | 82.71 |
| EES18176 | Sorghum | cytosol | 83.25 | 82.48 |
| Zm00001d038109_P002 | Maize | cytosol | 80.9 | 79.77 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 64.62 | 78.96 |
| KRH41782 | Soybean | cytosol, nucleus | 66.51 | 77.69 |
| VIT_17s0000g02960.t01 | Wine grape | cytosol | 75.47 | 75.83 |
| KRH39114 | Soybean | nucleus | 72.64 | 74.94 |
| KRH48600 | Soybean | cytosol | 70.28 | 74.31 |
| PGSC0003DMT400032131 | Potato | cytosol | 72.88 | 73.75 |
| KRH60482 | Soybean | cytosol | 70.75 | 73.35 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 72.41 | 73.27 |
| CDY36228 | Canola | cytosol | 58.96 | 72.05 |
| CDX96131 | Canola | cytosol | 58.96 | 72.05 |
| CDY21722 | Canola | cytosol | 66.04 | 71.98 |
| CDX81858 | Canola | cytosol | 65.8 | 71.72 |
| AT1G18040.1 | Thale cress | cytosol | 66.04 | 71.61 |
| AT1G66750.1 | Thale cress | cytosol | 58.73 | 71.55 |
| Bra031013.1-P | Field mustard | cytosol | 63.44 | 71.35 |
| CDX96739 | Canola | cytosol | 65.8 | 70.99 |
| Bra016572.1-P | Field mustard | cytosol | 65.57 | 70.74 |
| AT1G73690.1 | Thale cress | cytosol | 66.04 | 70.35 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 78.07 | 70.13 |
| CDX83876 | Canola | cytosol | 64.86 | 69.62 |
| CDX73001 | Canola | cytosol | 64.15 | 68.51 |
| Bra015974.1-P | Field mustard | cytosol | 64.15 | 68.51 |
| CDY60132 | Canola | cytosol | 63.44 | 67.76 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 76.65 | 64.87 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 33.49 | 48.3 |
| TraesCS6B01G105100.1 | Wheat | cytosol | 32.31 | 46.76 |
| TraesCS5B01G144100.2 | Wheat | cytosol | 29.48 | 41.12 |
| TraesCS4B01G123100.1 | Wheat | cytosol | 28.07 | 38.51 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 29.01 | 37.73 |
| TraesCS1B01G212800.1 | Wheat | cytosol | 33.49 | 30.21 |
| TraesCS5B01G536500.1 | Wheat | cytosol | 27.36 | 26.19 |
| TraesCS6B01G296700.2 | Wheat | cytosol | 28.07 | 25.87 |
| TraesCS6B01G244100.1 | Wheat | nucleus | 30.42 | 19.28 |
| TraesCS2B01G364800.5 | Wheat | nucleus | 31.6 | 18.23 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS1B01G256600 | EnsemblPlants:TraesCS1B01G256600.1 |
| TIGR:cd07841 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:452283678..452289062
Molecular Weight (calculated)
47392.3 Da
IEP (calculated)
9.165
GRAVY (calculated)
-0.338
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGDDAG EKRVTDRYLK REVLGEGTYG VVFKAIDTKT GETVAIKRIR LGKYKEGVNF TALREIKLLK ELKDPNIIEL IDAFPYKGNL HLVFEFMETD
101: LEAVIRDRNI VLSPADIKSY IQMMLKGLAF CHKKWVLHRD MKPNNLLIGA EGQLKLGDFG LARIFGSPER NFTHQVFARW YRAPELLFGT KQYGSAVDVW
201: AAGCIFAELL LRRPFLQGSS DIDQLGKIFA AFGTPKSSQW PDMVCLPDYV EYQFVSAPPL RSLFPMASDD ALDLLSRMFT YDPKARITAQ QALEHRYFSS
301: VPAPTKPNLL PRPKLKGDPG NDKIPDLNLQ GGPVVVSPPR KLRRVSAPDG MEINAHPAEK AEEHPTTGMR RSEGMSSQSS RIPMSVDVGV VFGTRPAPRP
401: TLNSADKSCL KRKLDMDPDF EYAE
101: LEAVIRDRNI VLSPADIKSY IQMMLKGLAF CHKKWVLHRD MKPNNLLIGA EGQLKLGDFG LARIFGSPER NFTHQVFARW YRAPELLFGT KQYGSAVDVW
201: AAGCIFAELL LRRPFLQGSS DIDQLGKIFA AFGTPKSSQW PDMVCLPDYV EYQFVSAPPL RSLFPMASDD ALDLLSRMFT YDPKARITAQ QALEHRYFSS
301: VPAPTKPNLL PRPKLKGDPG NDKIPDLNLQ GGPVVVSPPR KLRRVSAPDG MEINAHPAEK AEEHPTTGMR RSEGMSSQSS RIPMSVDVGV VFGTRPAPRP
401: TLNSADKSCL KRKLDMDPDF EYAE
001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
Arabidopsis Description
CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.