Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G238500.1 | Wheat | cytosol | 29.28 | 60.06 |
| TraesCS4B01G356500.1 | Wheat | cytosol | 31.04 | 47.43 |
| Solyc01g091650.2.1 | Tomato | cytosol | 26.94 | 41.82 |
| PGSC0003DMT400071374 | Potato | cytosol | 26.94 | 41.82 |
| GSMUA_Achr11P... | Banana | cytosol | 27.53 | 41.78 |
| TraesCS1B01G196500.2 | Wheat | cytosol | 27.38 | 41.65 |
| VIT_15s0048g01980.t01 | Wine grape | cytosol | 26.79 | 41.5 |
| KRH65148 | Soybean | cytosol | 26.79 | 41.22 |
| KRH48239 | Soybean | cytosol | 26.65 | 40.81 |
| GSMUA_Achr11P... | Banana | cytosol | 26.94 | 40.71 |
| GSMUA_Achr8P11930_001 | Banana | cytosol | 26.94 | 40.53 |
| AT3G61140.1 | Thale cress | cytosol | 25.48 | 39.46 |
| Bra007576.1-P | Field mustard | cytosol | 25.18 | 39.45 |
| CDY52333 | Canola | cytosol | 25.62 | 39.41 |
| CDY65304 | Canola | cytosol | 25.48 | 39.28 |
| Bra003438.1-P | Field mustard | cytosol | 25.77 | 38.85 |
| CDX67853 | Canola | cytosol | 25.62 | 38.63 |
| CDY45683 | Canola | cytosol | 25.48 | 38.41 |
| TraesCS2B01G361900.1 | Wheat | golgi, plastid | 7.91 | 13.92 |
| TraesCS6B01G242700.1 | Wheat | cytosol | 7.47 | 12.91 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G257700.1 | EnsemblPlantsGene:TraesCS7B01G257700 | Gene3D:1.25.40.570 | GO:GO:0000338 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008180 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:CSN1 | InterPro:Rpn7/CSN1 | ncoils:Coil | PANTHER:PTHR14145 |
| PANTHER:PTHR14145:SF2 | PFAM:PF10602 | SEG:seg | MapMan:19.2.3.3.1.1 | : | : |
Description
No Description!
Coordinates
chr7B:-:478481691..478487100
Molecular Weight (calculated)
75954.6 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.259
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGPNMSSPS ARHISAHTSK PSRCSLPFSL LGFSSPIQPA HALLPRRPLS PLYRALPRTL ARIPNTMDAW SGVSADAAAA GANGLGGGWR ADVEAAAATS
101: GLGGWGEASA ELLDVEAYVA PYSGRTRLAR LMAISYKCGV EAIQFEALRV AHDEAKAGED TMFYLYVVRE IDGRLGQGYL LDQAWVDSVN RRAEQRKETL
201: LSQLQIYQSN QIKESIRMGY NQIGDFYFAH GHLSEAFKSY IATEEHCSTS EHAIQMCMNA IHVNLELCDF ARVLNYASKA KGSQDPLSPI TTAKLQAVEG
301: LGYLGQQQYK LAALQFIETG PELGSNYSEV IAPQDVATYG ALCALALFNY TEIKTKVVEN VQFGSFLDLV PEVKDLVNAF YYSQRNTCME VLERLKQRLM
401: MDLHLGHHMD FLCLLISQKL EFMPSTVCDF STLYDLLMKT PSPINEEQPR VNANGPQLNS ASNLILPENF NDETLLAESS HYKFLKSKDL FDSLGRRKHN
501: WVSTCQARAL LQNAILFVVD DFDSEARDAR RTDGQVLMVS DARFSMLKVV FGSYTTTTKP LKEKLKSKED AEIVRFEMRG DIWARRRMCL RDNPDFHLLQ
601: WRKTSGLKRA QVRQQEEASS QDSNSNRLLE QVQLTVKNLV EELKINTRAV TESSQAIAKS CQDVVEACKL TVASTSTGAG VVN
101: GLGGWGEASA ELLDVEAYVA PYSGRTRLAR LMAISYKCGV EAIQFEALRV AHDEAKAGED TMFYLYVVRE IDGRLGQGYL LDQAWVDSVN RRAEQRKETL
201: LSQLQIYQSN QIKESIRMGY NQIGDFYFAH GHLSEAFKSY IATEEHCSTS EHAIQMCMNA IHVNLELCDF ARVLNYASKA KGSQDPLSPI TTAKLQAVEG
301: LGYLGQQQYK LAALQFIETG PELGSNYSEV IAPQDVATYG ALCALALFNY TEIKTKVVEN VQFGSFLDLV PEVKDLVNAF YYSQRNTCME VLERLKQRLM
401: MDLHLGHHMD FLCLLISQKL EFMPSTVCDF STLYDLLMKT PSPINEEQPR VNANGPQLNS ASNLILPENF NDETLLAESS HYKFLKSKDL FDSLGRRKHN
501: WVSTCQARAL LQNAILFVVD DFDSEARDAR RTDGQVLMVS DARFSMLKVV FGSYTTTTKP LKEKLKSKED AEIVRFEMRG DIWARRRMCL RDNPDFHLLQ
601: WRKTSGLKRA QVRQQEEASS QDSNSNRLLE QVQLTVKNLV EELKINTRAV TESSQAIAKS CQDVVEACKL TVASTSTGAG VVN
001: MERDEEASGP MMEMCTNGGE ETSNRRPIIS GEPLDIEAYA ALYKGRTKIM RLLFIANHCG GNHALQFDAL RMAYDEIKKG ENTQLFREVV NKIGNRLGEK
101: YGMDLAWCEA VDRRAEQKKV KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM NAILVSIEMG QFTHVTSYVN
201: KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN
301: DFYSSRYASC LEYLASLKSN LLLDIHLHDH VDTLYDQIRK KALIQYTLPF VSVDLSRMAD AFKTSVSGLE KELEALITDN QIQARIDSHN KILYARHADQ
401: RNATFQKVLQ MGNEFDRDVR AMLLRANLLK HEYHARSARK L
101: YGMDLAWCEA VDRRAEQKKV KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM NAILVSIEMG QFTHVTSYVN
201: KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN
301: DFYSSRYASC LEYLASLKSN LLLDIHLHDH VDTLYDQIRK KALIQYTLPF VSVDLSRMAD AFKTSVSGLE KELEALITDN QIQARIDSHN KILYARHADQ
401: RNATFQKVLQ MGNEFDRDVR AMLLRANLLK HEYHARSARK L
Arabidopsis Description
CSN1SK31 [Source:UniProtKB/TrEMBL;Acc:A0A178VFN7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.