Factsheet for Solyc01g091650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008840.2.1
Solyc01g090290.2.1
Solyc01g091650.2.1
Solyc01g102560.2.1
Solyc01g102570.2.1
Solyc01g102590.2.1
Solyc01g102600.2.1
Solyc01g104600.2.1
Solyc02g093920.2.1
Solyc04g080160.2.1
Solyc06g073150.2.1
Solyc06g076150.2.1
Solyc10g081150.1.1
Solyc11g017300.1.1
Solyc11g062430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61140.1	Solyc01g090290.2.1	AT1G02090.1	10330469
AT3G61140.1	Solyc01g090290.2.1	AT1G02090.1	11742986
AT3G61140.1	Solyc01g090290.2.1	AT1G02090.1	11854419
AT3G61140.1	Solyc01g090290.2.1	AT1G02090.1	12615944
AT3G61140.1	Solyc06g073150.2.1	AT1G22920.1	12615944
AT3G61140.1	Solyc11g017300.1.1	AT1G22920.1	12615944
AT3G61140.1	Solyc06g073150.2.1	AT1G22920.1	9811788
AT3G61140.1	Solyc11g017300.1.1	AT1G22920.1	9811788
AT3G61140.1	Solyc06g073150.2.1	AT1G71230.1	9811788
AT3G61140.1	Solyc11g017300.1.1	AT1G71230.1	9811788
AT3G61140.1	Solyc01g008840.2.1	AT2G26990.1	11854419
AT3G61140.1	Solyc10g081150.1.1	AT2G26990.1	11854419
AT3G61140.1	Solyc11g062430.1.1	AT2G26990.1	11854419
AT3G61140.1	Solyc01g008840.2.1	AT2G26990.1	12615944
AT3G61140.1	Solyc10g081150.1.1	AT2G26990.1	12615944
AT3G61140.1	Solyc11g062430.1.1	AT2G26990.1	12615944
AT3G61140.1	Solyc01g102560.2.1	AT3G56150.1	11029466
AT3G61140.1	Solyc01g102570.2.1	AT3G56150.1	11029466
AT3G61140.1	Solyc01g102590.2.1	AT3G56150.1	11029466
AT3G61140.1	Solyc01g102600.2.1	AT3G56150.1	11029466
AT3G61140.1	Solyc06g076150.2.1	AT3G56150.1	11029466
AT3G61140.1	Solyc01g091650.2.1	AT3G61140.1	12615944
AT3G61140.1	Solyc01g104600.2.1	AT4G14110.1	11701877
AT3G61140.1	Solyc01g104600.2.1	AT4G14110.1	12615944
AT3G61140.1	Solyc01g104600.2.1	AT4G14110.1	9811788
AT3G61140.1	Solyc02g093920.2.1	AT5G14250.1	12615944
AT3G61140.1	Solyc04g080160.2.1	AT5G42970.1	11854419
AT3G61140.1	Solyc04g080160.2.1	AT5G42970.1	12615944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071374	Potato	cytosol	98.64	98.64
VIT_15s0048g01980.t01	Wine grape	cytosol	83.41	83.22
KRH65148	Soybean	cytosol	83.18	82.43
KRH48239	Soybean	cytosol	82.95	81.84
AT3G61140.1	Thale cress	cytosol	77.95	77.78
Bra003438.1-P	Field mustard	cytosol	78.86	76.6
CDX67853	Canola	cytosol	78.86	76.6
CDY45683	Canola	cytosol	78.41	76.16
Bra007576.1-P	Field mustard	cytosol	75.23	75.92
CDY52333	Canola	cytosol	76.36	75.68
CDY65304	Canola	cytosol	76.14	75.62
HORVU0Hr1G029090.1	Barley	endoplasmic reticulum	19.09	75.0
GSMUA_Achr11P...	Banana	cytosol	72.95	71.02
EER92981	Sorghum	cytosol	71.36	70.88
Os03t0116500-01	Rice	cytosol	70.91	70.75
GSMUA_Achr8P11930_001	Banana	cytosol	72.95	70.7
GSMUA_Achr11P...	Banana	cytosol	72.27	70.67
Zm00001d027359_P001	Maize	cytosol, extracellular	71.36	70.56
TraesCS1D01G187600.1	Wheat	cytosol	60.91	69.97
TraesCS4D01G350200.1	Wheat	cytosol, golgi	69.09	68.16
TraesCS5A01G525900.1	Wheat	cytosol, unclear	68.86	67.94
TraesCS4B01G356500.1	Wheat	cytosol	68.86	67.79
TraesCS1A01G188800.1	Wheat	cytosol	65.91	66.51
TraesCS1B01G196500.2	Wheat	cytosol	66.59	65.26
HORVU1Hr1G048620.1	Barley	plastid	66.82	60.37
HORVU6Hr1G027500.11	Barley	plastid	37.73	58.45
Zm00001d048502_P002	Maize	cytosol	22.05	56.73
HORVU4Hr1G086160.1	Barley	cytosol	67.73	54.18
TraesCS5D01G238500.1	Wheat	cytosol	35.0	46.25
TraesCS7B01G257700.1	Wheat	plastid	41.82	26.94
Solyc07g009140.2.1	Tomato	nucleus	17.05	19.43

Protein Annotations

Gene3D:1.25.40.570	MapMan:19.2.3.3.1.1	InterPro:CSN1	ncoils:Coil	GO:GO:0000003	GO:GO:0000338
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006461	GO:GO:0006464	GO:GO:0006950	GO:GO:0006972	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008180	GO:GO:0009628	GO:GO:0009646	GO:GO:0009651	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	InterPro:IPR000717
UniProt:K4AZA5	InterPro:PCI_dom	PFAM:PF01399	PFAM:PF10602	PFscan:PS50250	PANTHER:PTHR14145
PANTHER:PTHR14145:SF2	InterPro:Rpn7/CSN1	SMART:SM00088	SMART:SM00753	SUPFAM:SSF46785	EnsemblPlantsGene:Solyc01g091650.2
EnsemblPlants:Solyc01g091650.2.1	UniParc:UPI00027683C4	InterPro:WH_DNA-bd_sf	:	:	:

Description

No Description!

Coordinates

chr1:-:85244190..85249199

Molecular Weight (calculated)

50226.9 Da

IEP (calculated)

6.722

GRAVY (calculated)

-0.396

Length

440 amino acids

Sequence
(BLAST)

001: MEPDEDLGLI AEEIYANGDE NKQRHRPIIS GEQLDIEAYA ALYSGRTKIM RLLFIADRCG NASMQLEALR MAYDEIKKGE NTQLFREVVQ KIDGRLGTNY
101: GPDPAWADSV DRRADLRKEK LESELNAYRT NLIKESIRMG YNDFGDFYYA HGQLGEAFKN YVRTRDYCTT AKHIIHMCLN AILVSIEMGQ FTHVTSYVSK
201: AEQSQDALDA ITVAKLRCAA GLAHLEAKKY KLAARKFLEV GPELGNNYTE VIAPQDVATY GGLCALASFD RAELKSKVID NINFRNFLEL VPEIRELIHD
301: FYTSHYASCL EYLGNLKANL LLDIHLHDHV ETLYDQIRSK ALIQYTHPFV SVDLNMMANA FKTSVAGLEK ELESLITDNQ IQARIDSHNK ILYARHADQR
401: NATFQKVLQT GKEFDRDVRS MLLRANLLKH DYIARTSRKH

Best Arabidopsis Sequence Match ( AT3G61140.1 )
(BLAST)

001: MERDEEASGP MMEMCTNGGE ETSNRRPIIS GEPLDIEAYA ALYKGRTKIM RLLFIANHCG GNHALQFDAL RMAYDEIKKG ENTQLFREVV NKIGNRLGEK
101: YGMDLAWCEA VDRRAEQKKV KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM NAILVSIEMG QFTHVTSYVN
201: KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN
301: DFYSSRYASC LEYLASLKSN LLLDIHLHDH VDTLYDQIRK KALIQYTLPF VSVDLSRMAD AFKTSVSGLE KELEALITDN QIQARIDSHN KILYARHADQ
401: RNATFQKVLQ MGNEFDRDVR AMLLRANLLK HEYHARSARK L

Arabidopsis Description

CSN1SK31 [Source:UniProtKB/TrEMBL;Acc:A0A178VFN7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.