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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G61140.1 TraesCS2A01G228300.1 AT1G02090.1 10330469
AT3G61140.1 TraesCS2B01G253600.2 AT1G02090.1 10330469
AT3G61140.1 TraesCS2D01G239100.1 AT1G02090.1 10330469
AT3G61140.1 TraesCS2A01G228300.1 AT1G02090.1 11742986
AT3G61140.1 TraesCS2B01G253600.2 AT1G02090.1 11742986
AT3G61140.1 TraesCS2D01G239100.1 AT1G02090.1 11742986
AT3G61140.1 TraesCS2A01G228300.1 AT1G02090.1 11854419
AT3G61140.1 TraesCS2B01G253600.2 AT1G02090.1 11854419
AT3G61140.1 TraesCS2D01G239100.1 AT1G02090.1 11854419
AT3G61140.1 TraesCS2A01G228300.1 AT1G02090.1 12615944
AT3G61140.1 TraesCS2B01G253600.2 AT1G02090.1 12615944
AT3G61140.1 TraesCS2D01G239100.1 AT1G02090.1 12615944
AT3G61140.1 TraesCS2A01G504600.1 AT1G22920.1 12615944
AT3G61140.1 TraesCS2D01G505300.1 AT1G22920.1 12615944
AT3G61140.1 TraesCS2A01G504600.1 AT1G22920.1 9811788
AT3G61140.1 TraesCS2D01G505300.1 AT1G22920.1 9811788
AT3G61140.1 TraesCS2A01G504600.1 AT1G71230.1 9811788
AT3G61140.1 TraesCS2D01G505300.1 AT1G71230.1 9811788
AT3G61140.1 TraesCS3A01G191800.1 AT2G26990.1 11854419
AT3G61140.1 TraesCS3B01G219800.1 AT2G26990.1 11854419
AT3G61140.1 TraesCS3D01G194400.1 AT2G26990.1 11854419
AT3G61140.1 TraesCS3A01G191800.1 AT2G26990.1 12615944
AT3G61140.1 TraesCS3B01G219800.1 AT2G26990.1 12615944
AT3G61140.1 TraesCS3D01G194400.1 AT2G26990.1 12615944
AT3G61140.1 TraesCS5A01G220000.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS5A01G406000.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS5B01G219100.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS5B01G410800.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS5D01G228100.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS5D01G416000.1 AT3G56150.1 11029466
AT3G61140.1 TraesCS1A01G188800.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS1B01G196500.2 AT3G61140.1 12615944
AT3G61140.1 TraesCS1D01G187600.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS4B01G356500.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS4D01G350200.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS5A01G525900.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS5D01G238500.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS7B01G257700.1 AT3G61140.1 12615944
AT3G61140.1 TraesCS2A01G301900.1 AT4G14110.1 11701877
AT3G61140.1 TraesCS2D01G300400.2 AT4G14110.1 11701877
AT3G61140.1 TraesCS2A01G301900.1 AT4G14110.1 12615944
AT3G61140.1 TraesCS2D01G300400.2 AT4G14110.1 12615944
AT3G61140.1 TraesCS2A01G301900.1 AT4G14110.1 9811788
AT3G61140.1 TraesCS2D01G300400.2 AT4G14110.1 9811788
AT3G61140.1 TraesCS7A01G315600.1 AT5G14250.1 12615944
AT3G61140.1 TraesCS7B01G216600.2 AT5G14250.1 12615944
AT3G61140.1 TraesCS7D01G312600.2 AT5G14250.1 12615944
AT3G61140.1 TraesCS4A01G041600.1 AT5G42970.1 11854419
AT3G61140.1 TraesCS4B01G262600.1 AT5G42970.1 11854419
AT3G61140.1 TraesCS4D01G262700.1 AT5G42970.1 11854419
AT3G61140.1 TraesCS4A01G041600.1 AT5G42970.1 12615944
AT3G61140.1 TraesCS4B01G262600.1 AT5G42970.1 12615944
AT3G61140.1 TraesCS4D01G262700.1 AT5G42970.1 12615944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G350200.1 Wheat cytosol, golgi 99.55 99.78
TraesCS5A01G525900.1 Wheat cytosol, unclear 98.21 98.43
HORVU0Hr1G029090.1 Barley endoplasmic reticulum 23.04 91.96
Os03t0116500-01 Rice cytosol 83.45 84.58
EER92981 Sorghum cytosol 83.67 84.42
Zm00001d027359_P001 Maize cytosol, extracellular 82.55 82.92
HORVU4Hr1G086160.1 Barley cytosol 94.63 76.91
HORVU6Hr1G027500.11 Barley plastid 46.31 72.89
TraesCS1B01G196500.2 Wheat cytosol 72.93 72.61
KRH65148 Soybean cytosol 70.25 70.72
Zm00001d048502_P002 Maize cytosol 26.85 70.18
KRH48239 Soybean cytosol 69.8 69.96
GSMUA_Achr11P... Banana cytosol 69.8 69.33
VIT_15s0048g01980.t01 Wine grape cytosol 68.23 69.16
PGSC0003DMT400071374 Potato cytosol 68.01 69.09
GSMUA_Achr11P... Banana cytosol 69.8 69.03
GSMUA_Achr8P11930_001 Banana cytosol 70.02 68.94
Solyc01g091650.2.1 Tomato cytosol 67.79 68.86
AT3G61140.1 Thale cress cytosol 65.77 66.67
CDY52333 Canola cytosol 65.77 66.22
Bra007576.1-P Field mustard cytosol 64.21 65.83
CDY65304 Canola cytosol 65.1 65.69
CDY45683 Canola cytosol 66.0 65.12
CDX67853 Canola cytosol 65.77 64.9
Bra003438.1-P Field mustard cytosol 65.77 64.9
TraesCS7B01G257700.1 Wheat plastid 47.43 31.04
TraesCS2B01G361900.1 Wheat golgi, plastid 17.9 20.62
TraesCS6B01G242700.1 Wheat cytosol 17.67 20.0
Protein Annotations
Gene3D:1.25.40.570MapMan:19.2.3.3.1.1InterPro:CSN1ncoils:CoilGO:GO:0000338GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0008180GO:GO:0009987GO:GO:0019538InterPro:IPR000717InterPro:PCI_domPFAM:PF01399
PFAM:PF10602PFscan:PS50250PANTHER:PTHR14145PANTHER:PTHR14145:SF2InterPro:Rpn7/CSN1SMART:SM00088
SMART:SM00753SUPFAM:SSF46785EnsemblPlantsGene:TraesCS4B01G356500EnsemblPlants:TraesCS4B01G356500.1InterPro:WH_DNA-bd_sfSEG:seg
Description
No Description!
Coordinates
chr4B:+:646968226..646972910
Molecular Weight (calculated)
50368.3 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.285
Length
447 amino acids
Sequence
(BLAST)
001: MDVDCEVSAA AAAAVTNGLG GGEQAAAAPP VSADQLDVEA YAAQYSGRTR VARLLFIAER CGVEAIQLEA LRMAHDEARA REDTVLYLDA VLKINGRLGP
101: RYRHDQAWVD SVNRRAEQRK EKLETELNGY RTNLIKESIR MGYNDIGDFF YAHGHLSEAF KSYIRTRDYC TTSKHIVQMC MHVILVSIEL GQFAHVTNYV
201: SKAEQTPDTL DAVIVAKLRA AAGLANLETK KYKLAARKFL ETGPELGSNY SEVIAPQDVA VYGALCALAS FDRSELKSKV IDNINFRNFL ELVPEVRELV
301: NDFYASRYGS CLEHLEKLKP NLLLDIHLRE HLGTLYNDIR HKAIIQYTLP FISVDLNTMA SAFKSSVSML EKELAALITE NKIQARIDSH NKILYARHAD
401: QRNATFQRAL ETGNEFERDI KAMLLRANLI KHDFNQKNWP GQRKMNL
Best Arabidopsis Sequence Match ( AT3G61140.1 )
(BLAST)
001: MERDEEASGP MMEMCTNGGE ETSNRRPIIS GEPLDIEAYA ALYKGRTKIM RLLFIANHCG GNHALQFDAL RMAYDEIKKG ENTQLFREVV NKIGNRLGEK
101: YGMDLAWCEA VDRRAEQKKV KLENELSSYR TNLIKESIRM GYNDFGDFYY ACGMLGDAFK NYIRTRDYCT TTKHIIHMCM NAILVSIEMG QFTHVTSYVN
201: KAEQNPETLE PMVNAKLRCA SGLAHLELKK YKLAARKFLD VNPELGNSYN EVIAPQDIAT YGGLCALASF DRSELKQKVI DNINFRNFLE LVPDVRELIN
301: DFYSSRYASC LEYLASLKSN LLLDIHLHDH VDTLYDQIRK KALIQYTLPF VSVDLSRMAD AFKTSVSGLE KELEALITDN QIQARIDSHN KILYARHADQ
401: RNATFQKVLQ MGNEFDRDVR AMLLRANLLK HEYHARSARK L
Arabidopsis Description
CSN1SK31 [Source:UniProtKB/TrEMBL;Acc:A0A178VFN7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.