Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21722 | Canola | cytosol | 90.54 | 91.0 |
| CDX81858 | Canola | cytosol | 90.54 | 91.0 |
| CDX96739 | Canola | cytosol | 90.54 | 90.08 |
| Bra031013.1-P | Field mustard | cytosol | 86.7 | 89.92 |
| Bra016572.1-P | Field mustard | cytosol | 90.28 | 89.82 |
| CDX83876 | Canola | cytosol | 88.49 | 87.59 |
| AT1G73690.1 | Thale cress | cytosol | 83.89 | 82.41 |
| KRH41782 | Soybean | cytosol, nucleus | 70.33 | 75.76 |
| KRH39114 | Soybean | nucleus | 78.01 | 74.21 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 65.47 | 73.78 |
| KRH48600 | Soybean | cytosol | 75.45 | 73.57 |
| KRH60482 | Soybean | cytosol | 75.96 | 72.62 |
| PGSC0003DMT400032131 | Potato | cytosol | 74.94 | 69.93 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 74.68 | 69.69 |
| AT1G66750.1 | Thale cress | cytosol | 61.13 | 68.68 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 72.12 | 66.35 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 71.61 | 66.04 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 71.61 | 66.04 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 71.61 | 66.04 |
| Zm00001d010476_P001 | Maize | cytosol | 69.05 | 63.08 |
| EES18176 | Sorghum | cytosol | 68.8 | 62.85 |
| Zm00001d038109_P002 | Maize | cytosol | 67.26 | 61.16 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 73.66 | 61.02 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 73.15 | 57.09 |
| AT3G48750.1 | Thale cress | cytosol | 35.81 | 47.62 |
| AT1G76540.1 | Thale cress | cytosol | 32.23 | 40.26 |
| AT2G38620.2 | Thale cress | cytosol | 31.71 | 39.87 |
| AT3G54180.1 | Thale cress | cytosol | 31.46 | 39.81 |
| AT1G20930.1 | Thale cress | cytosol | 31.97 | 39.68 |
| AT5G63610.1 | Thale cress | cytosol | 35.81 | 29.79 |
| AT4G19110.2 | Thale cress | cytosol | 30.69 | 25.86 |
| AT4G13020.5 | Thale cress | cytosol | 28.39 | 25.0 |
| AT5G45430.1 | Thale cress | cytosol | 29.41 | 23.05 |
| AT5G63370.1 | Thale cress | nucleus | 31.2 | 19.93 |
| AT1G67580.1 | Thale cress | nucleus | 35.55 | 18.48 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| EntrezGene:838384 | UniProt:A0A178WHV0 | ProteinID:AAF78394.1 | ProteinID:AAF97821.1 | EMBL:AB047274 | ProteinID:AEE29667.1 |
| ArrayExpress:AT1G18040 | EnsemblPlantsGene:AT1G18040 | RefSeq:AT1G18040 | TAIR:AT1G18040 | RefSeq:AT1G18040-TAIR-G | EnsemblPlants:AT1G18040.1 |
| TAIR:AT1G18040.1 | EMBL:AY099677 | EMBL:AY128857 | Unigene:At.14957 | Symbol:CDKD1;3 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008353 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0045944 | GO:GO:0051301 | GO:GO:0051726 |
| GO:GO:0070985 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_173244.1 | ProteinID:OAP17948.1 | PFAM:PF00069 |
| PIRSF:PIRSF000654 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q9LMT0 | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000AB048 | : | : | : |
Description
CDKD-3Cyclin-dependent kinase D-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT0]
Coordinates
chr1:-:6206871..6209528
Molecular Weight (calculated)
44532.1 Da
IEP (calculated)
10.023
GRAVY (calculated)
-0.367
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.