Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015974.1-P | Field mustard | cytosol | 87.44 | 87.66 |
| CDX73001 | Canola | cytosol | 86.43 | 86.65 |
| CDY60132 | Canola | cytosol | 85.93 | 86.15 |
| AT1G18040.1 | Thale cress | cytosol | 82.41 | 83.89 |
| KRH41782 | Soybean | cytosol, nucleus | 68.84 | 75.48 |
| KRH39114 | Soybean | nucleus | 76.13 | 73.72 |
| KRH60482 | Soybean | cytosol | 75.13 | 73.11 |
| KRH48600 | Soybean | cytosol | 73.37 | 72.82 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 62.06 | 71.18 |
| AT1G66750.1 | Thale cress | cytosol | 60.3 | 68.97 |
| PGSC0003DMT400032131 | Potato | cytosol | 72.11 | 68.5 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 71.86 | 68.26 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 70.6 | 66.12 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 70.35 | 66.04 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 70.35 | 66.04 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 70.35 | 66.04 |
| EES18176 | Sorghum | cytosol | 67.59 | 62.85 |
| Zm00001d010476_P001 | Maize | cytosol | 67.34 | 62.62 |
| Zm00001d038109_P002 | Maize | cytosol | 65.83 | 60.93 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 72.11 | 60.81 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 71.86 | 57.09 |
| AT3G48750.1 | Thale cress | cytosol | 34.42 | 46.6 |
| AT1G76540.1 | Thale cress | cytosol | 31.16 | 39.62 |
| AT1G20930.1 | Thale cress | cytosol | 30.9 | 39.05 |
| AT2G38620.2 | Thale cress | cytosol | 30.4 | 38.91 |
| AT3G54180.1 | Thale cress | cytosol | 29.9 | 38.51 |
| AT5G63610.1 | Thale cress | cytosol | 33.92 | 28.72 |
| AT4G13020.5 | Thale cress | cytosol | 28.89 | 25.9 |
| AT4G19110.2 | Thale cress | cytosol | 30.15 | 25.86 |
| AT5G45430.1 | Thale cress | cytosol | 29.15 | 23.25 |
| AT5G63370.1 | Thale cress | nucleus | 30.9 | 20.1 |
| AT1G67580.1 | Thale cress | nucleus | 34.42 | 18.22 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| EntrezGene:843704 | UniProt:A0A178W7E4 | ProteinID:AAG52081.1 | EMBL:AB047275 | ProteinID:AEE35498.1 | ArrayExpress:AT1G73690 |
| EnsemblPlantsGene:AT1G73690 | RefSeq:AT1G73690 | TAIR:AT1G73690 | RefSeq:AT1G73690-TAIR-G | EnsemblPlants:AT1G73690.1 | TAIR:AT1G73690.1 |
| EMBL:AY063843 | EMBL:AY091227 | Unigene:At.17996 | Symbol:CDKD1;1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008353 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0051726 | GO:GO:0070985 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_177510.1 | ProteinID:OAP13661.1 | PFAM:PF00069 | PIRSF:PIRSF000654 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q9C9U2 |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000A3511 | : | : |
Description
CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
Coordinates
chr1:+:27714910..27717420
Molecular Weight (calculated)
45140.8 Da
IEP (calculated)
9.896
GRAVY (calculated)
-0.385
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.