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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G080600.1 Wheat nucleus 99.15 98.86
TraesCS5B01G075000.1 Wheat nucleus 98.58 98.3
HORVU5Hr1G018180.1 Barley nucleus 96.01 96.56
Os12t0588800-01 Rice nucleus 76.07 73.15
Zm00001d041345_P001 Maize cytosol 70.09 70.49
EES17294 Sorghum nucleus 72.65 70.25
Zm00001d030894_P002 Maize nucleus 68.66 69.86
TraesCS4A01G234600.1 Wheat cytosol 56.7 59.05
GSMUA_Achr4P07110_001 Banana nucleus 37.89 41.56
GSMUA_Achr10P... Banana nucleus 31.91 39.16
GSMUA_Achr6P16910_001 Banana cytosol 29.34 37.05
TraesCS4A01G046900.1 Wheat nucleus 36.47 36.47
VIT_18s0001g09160.t01 Wine grape nucleus 31.34 34.7
GSMUA_Achr6P07740_001 Banana nucleus 31.05 34.28
KRH52092 Soybean nucleus 29.06 32.48
KRH61407 Soybean nucleus 28.49 32.05
VIT_07s0129g00200.t01 Wine grape nucleus 29.34 31.21
KRH28363 Soybean nucleus 28.49 30.21
KRH77118 Soybean nucleus 28.21 29.82
AT4G37630.1 Thale cress nucleus 27.07 29.41
TraesCS5A01G161000.1 Wheat cytosol 29.34 29.1
CDY29570 Canola nucleus 26.78 28.14
CDX72643 Canola nucleus 27.07 27.94
Bra017840.1-P Field mustard nucleus 27.07 27.86
TraesCS7A01G479000.1 Wheat cytosol, nucleus, plastid 9.4 27.5
TraesCS5A01G200500.2 Wheat nucleus 25.36 27.47
TraesCS5A01G246800.1 Wheat nucleus 26.21 26.06
TraesCS5A01G247000.1 Wheat nucleus 26.21 25.92
TraesCS6A01G314900.1 Wheat nucleus 25.93 25.42
TraesCS2A01G164800.1 Wheat nucleus 23.93 24.35
TraesCS4A01G177400.1 Wheat cytosol 21.08 22.22
TraesCS2A01G208300.1 Wheat nucleus, peroxisome, plasma membrane 17.95 20.32
Protein Annotations
EnsemblPlants:TraesCS5A01G068600.1EnsemblPlantsGene:TraesCS5A01G068600Gene3D:1.10.472.10GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:Cyclin_C-domInterPro:Cyclin_NPANTHER:PTHR10177
PANTHER:PTHR10177:SF225PFAM:PF00134PFAM:PF02984PIRSF:PIRSF001771ScanProsite:PS00292SEG:seg
SMART:SM00385SUPFAM:SSF47954TIGR:cd00043MapMan:13.1.1.1.4::
Description
No Description!
Coordinates
chr5A:+:76955858..76957301
Molecular Weight (calculated)
37757.3 Da
IEP (calculated)
4.403
GRAVY (calculated)
-0.071
Length
351 amino acids
Sequence
(BLAST)
001: MPGMEEAEDY ASCAFSLTCP EDGAELGDGV VDDGDLFLFY AGGGAADDED GDNEYVEQLV SKEASFCSSS DSGDADCSSA ASEDWFLQAR LAAVKWILET
101: RGCFGFGHRT AYLAIAYFDR FFLRRRVDRA AMPWAARLLS VACVSVAAKM EEYCAPALSE LDAGGGYEFC SASVRRMELL VLSTLGWRMA AVTPFDYLPC
201: FSSRLDRHDG RGGGGHDPAR VALKSIGFIF ATAEAGSVLD YRPSTVAAAA ILAASYGALL TKEALESKMD NLSPSCPIEK EHVHACYSMM VGDLRNRKSN
301: GKRSLPCSDS NEVATSTYDS VLVDDVADTA AFMAAVSEMN KRIRLEPPGI H
Best Arabidopsis Sequence Match ( AT4G37630.1 )
(BLAST)
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.