Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003439_P001 | Maize | plastid | 55.83 | 52.76 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 82.5 | 28.21 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 68.33 | 24.85 |
| Zm00001d028092_P001 | Maize | cytosol | 50.0 | 22.06 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 56.67 | 19.26 |
| Os03t0203800-01 | Rice | nucleus | 49.17 | 17.1 |
| EER92677 | Sorghum | nucleus | 47.5 | 16.06 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 27.5 | 9.4 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 24.17 | 8.61 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 22.5 | 8.44 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 20.0 | 7.55 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 16.67 | 7.19 |
| TraesCS5A01G200500.2 | Wheat | nucleus | 18.33 | 6.79 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 19.17 | 6.5 |
| VIT_18s0001g09160.t01 | Wine grape | nucleus | 16.67 | 6.31 |
| TraesCS5A01G246800.1 | Wheat | nucleus | 18.33 | 6.23 |
| TraesCS5A01G247000.1 | Wheat | nucleus | 18.33 | 6.2 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 18.33 | 6.15 |
| KRH77118 | Soybean | nucleus | 16.67 | 6.02 |
| KRH61407 | Soybean | nucleus | 15.0 | 5.77 |
| AT4G37630.1 | Thale cress | nucleus | 15.0 | 5.57 |
| TraesCS2A01G164800.1 | Wheat | nucleus | 15.83 | 5.51 |
| KRH28363 | Soybean | nucleus | 15.0 | 5.44 |
| KRH52092 | Soybean | nucleus | 14.17 | 5.41 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 14.17 | 5.15 |
| CDY29570 | Canola | nucleus | 14.17 | 5.09 |
| CDX72643 | Canola | nucleus | 14.17 | 5.0 |
| Bra017840.1-P | Field mustard | nucleus | 14.17 | 4.99 |
| TraesCS2A01G208300.1 | Wheat | nucleus, peroxisome, plasma membrane | 11.67 | 4.52 |
| TraesCS4A01G177400.1 | Wheat | cytosol | 10.83 | 3.9 |
| GSMUA_Achr10P... | Banana | nucleus | 7.5 | 3.15 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G479000.1 | EnsemblPlantsGene:TraesCS7A01G479000 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF273 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr7A:+:671781074..671781526
Molecular Weight (calculated)
12724.9 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.352
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSVEYQSST MALVPILVAR GGSEGTTGPN LEEELKAILG SSWQQLQTGH VCSCYSVMIQ EEDRSVQSSR EVASSDVSAA APAGSPGTSV AMAVAANDNK
101: AIATTSADNK RRRLHFPQRQ
101: AIATTSADNK RRRLHFPQRQ
001: MKIIDLCPSL VSVTNVDGNT PLHLAAEIGN ESILWKMLRC GRADCMKINK QGQTAFILAC LNNHLDAALT LVENMRSMTM VELDAAFTGQ QPVIIDKMLE
101: KFPSLVLDVD EEQSTLLHKA VTQRNEEYAT KVIDLCPSLV SVTNVDGNTP LHLAAEIGNI NILWKMLETG EAECMKINKQ GQTAFILACL NNNVNSARIL
201: VEGTSSMTMV ELNAAFSEQQ QVIIDSILEK FPNLILDADE EQSTLLHKAC KSGNLEMART LLDVDVNQEI AEKVDKDGLT PLHRAVINGS VEILKEFLCK
301: APSSFNITTQ GTIETVFHLA AKYQKTKAFI FMAQSANIRQ LLYSLDAEDN TVLHVAASVD STSLVRHILS ETTIDVTLKN KKGFAAVDLI DKEGVDFPLL
401: SLWFRDEAEK IQRPARYVKF AHEPVELIRN TNNGEKLSSE SRAMDLLREG RDPRNKEREM HSESLQNARN TITIVAVLIA SVAFTCGINP PGGVHQDGPF
501: IGKATAGRTL AFKIFSVANN IALFTSLSIV TLLVSIISYR TKALKMCVVI AHKMMWLAVA SMATAYAASA WITVPHNEGS KWLVYTTSAI ASVALGSMFV
601: YVSFMMVKHI LKKDKLRRNQ SHGKTPSTTL DMEAAGDVGC YWF
101: KFPSLVLDVD EEQSTLLHKA VTQRNEEYAT KVIDLCPSLV SVTNVDGNTP LHLAAEIGNI NILWKMLETG EAECMKINKQ GQTAFILACL NNNVNSARIL
201: VEGTSSMTMV ELNAAFSEQQ QVIIDSILEK FPNLILDADE EQSTLLHKAC KSGNLEMART LLDVDVNQEI AEKVDKDGLT PLHRAVINGS VEILKEFLCK
301: APSSFNITTQ GTIETVFHLA AKYQKTKAFI FMAQSANIRQ LLYSLDAEDN TVLHVAASVD STSLVRHILS ETTIDVTLKN KKGFAAVDLI DKEGVDFPLL
401: SLWFRDEAEK IQRPARYVKF AHEPVELIRN TNNGEKLSSE SRAMDLLREG RDPRNKEREM HSESLQNARN TITIVAVLIA SVAFTCGINP PGGVHQDGPF
501: IGKATAGRTL AFKIFSVANN IALFTSLSIV TLLVSIISYR TKALKMCVVI AHKMMWLAVA SMATAYAASA WITVPHNEGS KWLVYTTSAI ASVALGSMFV
601: YVSFMMVKHI LKKDKLRRNQ SHGKTPSTTL DMEAAGDVGC YWF
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT5G54710]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.