Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017840.1-P | Field mustard | nucleus | 99.4 | 97.36 |
| CDX72643 | Canola | nucleus | 96.71 | 95.0 |
| AT4G37630.1 | Thale cress | nucleus | 80.24 | 82.97 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 35.93 | 36.36 |
| KRH77118 | Soybean | nucleus | 35.03 | 35.24 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 29.04 | 34.89 |
| KRH28363 | Soybean | nucleus | 34.43 | 34.74 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 32.93 | 34.59 |
| GSMUA_Achr10P... | Banana | nucleus | 28.44 | 33.22 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 28.14 | 26.78 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 28.14 | 26.7 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 28.14 | 26.7 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 27.84 | 26.65 |
| TraesCS4B01G080500.1 | Wheat | nucleus | 26.65 | 26.49 |
| TraesCS4B01G257900.1 | Wheat | cytosol | 26.05 | 26.36 |
| Os12t0588800-01 | Rice | nucleus | 28.74 | 26.3 |
| TraesCS4A01G234600.1 | Wheat | cytosol | 26.35 | 26.11 |
| TraesCS4D01G079400.1 | Wheat | cytosol | 26.35 | 26.11 |
| CDY54717 | Canola | nucleus | 20.66 | 25.94 |
| TraesCS4D01G257800.1 | Wheat | cytosol, nucleus, plastid | 26.65 | 25.87 |
| TraesCS4A01G046900.1 | Wheat | nucleus | 26.95 | 25.64 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 24.55 | 25.62 |
| CDX81286 | Canola | nucleus | 20.36 | 25.56 |
| CDY11608 | Canola | nucleus | 24.25 | 25.55 |
| Zm00001d030894_P002 | Maize | nucleus | 26.35 | 25.51 |
| Zm00001d041345_P001 | Maize | cytosol | 26.65 | 25.5 |
| EES17294 | Sorghum | nucleus | 27.54 | 25.34 |
| CDY38800 | Canola | nucleus | 23.65 | 24.76 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 12.57 | 24.42 |
| CDX76265 | Canola | nucleus | 26.65 | 24.38 |
| Os03t0203800-01 | Rice | nucleus | 25.15 | 24.35 |
| CDY57741 | Canola | nucleus | 26.35 | 24.11 |
| CDY08795 | Canola | nucleus | 22.16 | 24.03 |
| CDX89480 | Canola | nucleus | 25.45 | 23.94 |
| CDY67142 | Canola | nucleus | 24.25 | 23.89 |
| CDX68573 | Canola | nucleus | 25.15 | 23.86 |
| CDX83112 | Canola | nucleus | 25.15 | 23.86 |
| CDY69708 | Canola | nucleus | 26.65 | 23.8 |
| Zm00001d033330_P001 | Maize | nucleus | 25.15 | 23.73 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 26.65 | 23.67 |
| CDX72453 | Canola | nucleus | 25.45 | 23.61 |
| CDY25602 | Canola | nucleus | 25.15 | 23.6 |
| CDX75405 | Canola | nucleus | 26.35 | 23.59 |
| CDY49278 | Canola | nucleus | 26.05 | 23.58 |
| EER91226 | Sorghum | nucleus | 26.05 | 23.51 |
| CDY14561 | Canola | cytosol | 22.75 | 23.38 |
| CDY13755 | Canola | nucleus | 20.36 | 23.29 |
| EER92677 | Sorghum | nucleus | 24.55 | 23.1 |
| CDY30607 | Canola | nucleus | 24.25 | 22.95 |
| CDY02095 | Canola | nucleus | 22.46 | 22.87 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 23.95 | 22.66 |
| CDY17742 | Canola | nucleus | 23.95 | 22.54 |
| CDY23022 | Canola | nucleus | 22.16 | 22.49 |
| CDY59943 | Canola | nucleus | 24.25 | 22.44 |
| HORVU4Hr1G013700.2 | Barley | plastid | 26.35 | 22.28 |
| CDX69832 | Canola | nucleus | 19.76 | 22.22 |
| Zm00001d013728_P001 | Maize | cytosol | 24.25 | 22.19 |
| CDX97009 | Canola | nucleus | 19.46 | 22.18 |
| CDX76917 | Canola | nucleus | 23.05 | 21.75 |
| CDY33959 | Canola | nucleus | 19.46 | 21.31 |
| CDY37828 | Canola | nucleus | 19.46 | 21.04 |
| CDY01425 | Canola | nucleus | 21.86 | 20.62 |
| Zm00001d028092_P001 | Maize | cytosol | 16.47 | 20.22 |
| CDY12825 | Canola | nucleus | 21.26 | 19.83 |
| CDY21951 | Canola | nucleus | 16.77 | 18.54 |
| CDY22116 | Canola | nucleus | 16.47 | 18.46 |
| CDX90892 | Canola | nucleus | 7.49 | 16.45 |
| CDY40332 | Canola | cytosol | 16.47 | 16.18 |
| CDY10467 | Canola | cytosol | 16.17 | 15.93 |
| CDY55121 | Canola | cytosol | 14.97 | 14.58 |
| TraesCS7A01G479000.1 | Wheat | cytosol, nucleus, plastid | 5.09 | 14.17 |
| Zm00001d003439_P001 | Maize | plastid | 4.79 | 12.6 |
| CDX80803 | Canola | cytosol | 14.37 | 10.64 |
Protein Annotations
| EnsemblPlants:CDY29570 | EnsemblPlantsGene:GSBRNA2T00043294001 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF255 | PFAM:PF00134 | PIRSF:PIRSF001771 | ProteinID:CDY29570 | ProteinID:CDY29570.1 |
| SEG:seg | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EEF5C9 | UniProt:A0A078GSZ0 | MapMan:13.1.1.1.4 |
Description
BnaA03g54150DBnaA03g54150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSZ0]
Coordinates
chrLK032239:+:344827..346597
Molecular Weight (calculated)
38085.9 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.484
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEPRDSLAL SNLLICHESE SYDDDDDETK IERSDEQRKP HCFATIGDDD EDYVAELARK ENRRFDDDDD KPTKTTSSLD RLIAIDWILT TRTRFGFQHQ
101: TAYIAISYLD LFLQKRFIGL QKDESWAIRL LSVASLSLAA KMEERVVPGL SQYPQDQDFV FKPDVIRKTE LLILSTLDWK MSLITPFHYL NYFLAKISPD
201: PNQSVSKELV LLRSSESLLA LTKEISVTDY RQFVVAAATT LLASSTSSDI RLTREEMGNK FGSVSWWTSN ENDNVYSCYQ RMLEIEERKH MTPPELAVPG
301: PVVGSGSGAK RRLSFVDSDQ PSSSSPDAKR MRRL
101: TAYIAISYLD LFLQKRFIGL QKDESWAIRL LSVASLSLAA KMEERVVPGL SQYPQDQDFV FKPDVIRKTE LLILSTLDWK MSLITPFHYL NYFLAKISPD
201: PNQSVSKELV LLRSSESLLA LTKEISVTDY RQFVVAAATT LLASSTSSDI RLTREEMGNK FGSVSWWTSN ENDNVYSCYQ RMLEIEERKH MTPPELAVPG
301: PVVGSGSGAK RRLSFVDSDQ PSSSSPDAKR MRRL
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.