Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G37630.1 | KXG40187 | AT2G27960.1 | 20706207 |
| AT4G37630.1 | KXG40187 | AT2G27970.1 | 20706207 |
| AT4G37630.1 | EES04403 | AT3G48750.1 | 20706207 |
| AT4G37630.1 | KXG40336 | AT3G48750.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041345_P001 | Maize | cytosol | 90.36 | 93.98 |
| Zm00001d030894_P002 | Maize | nucleus | 86.5 | 91.01 |
| Os12t0588800-01 | Rice | nucleus | 73.28 | 72.88 |
| TraesCS5A01G068600.1 | Wheat | nucleus | 70.25 | 72.65 |
| TraesCS5D01G080600.1 | Wheat | nucleus | 70.25 | 72.44 |
| TraesCS5B01G075000.1 | Wheat | nucleus | 69.97 | 72.16 |
| HORVU5Hr1G018180.1 | Barley | nucleus | 69.15 | 71.92 |
| EER91226 | Sorghum | nucleus | 53.17 | 52.16 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 35.26 | 40.0 |
| GSMUA_Achr10P... | Banana | nucleus | 30.3 | 38.46 |
| EER92677 | Sorghum | nucleus | 35.54 | 36.34 |
| VIT_18s0001g09160.t01 | Wine grape | nucleus | 30.58 | 35.02 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 26.72 | 34.89 |
| VIT_07s0129g00200.t01 | Wine grape | nucleus | 30.3 | 33.33 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 29.2 | 33.33 |
| KRH61407 | Soybean | nucleus | 28.1 | 32.69 |
| KRH52092 | Soybean | nucleus | 27.82 | 32.17 |
| KRH28363 | Soybean | nucleus | 28.1 | 30.82 |
| KRH77118 | Soybean | nucleus | 27.82 | 30.42 |
| AT4G37630.1 | Thale cress | nucleus | 25.9 | 29.1 |
| CDX72643 | Canola | nucleus | 25.9 | 27.65 |
| CDY29570 | Canola | nucleus | 25.34 | 27.54 |
| OQU89443 | Sorghum | nucleus | 25.07 | 27.33 |
| Bra017840.1-P | Field mustard | nucleus | 25.62 | 27.27 |
| OQU92473 | Sorghum | nucleus | 25.62 | 26.88 |
| EER97558 | Sorghum | nucleus | 25.07 | 26.38 |
| EER96886 | Sorghum | nucleus | 26.17 | 25.13 |
| EES14027 | Sorghum | nucleus | 25.62 | 24.93 |
| EER96424 | Sorghum | cytosol | 25.9 | 24.61 |
| EES07560 | Sorghum | nucleus | 23.69 | 24.02 |
| KXG19603 | Sorghum | nucleus | 22.31 | 23.28 |
| EER99528 | Sorghum | cytosol | 18.18 | 21.02 |
| OQU84124 | Sorghum | nucleus | 19.01 | 16.16 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EntrezGene:8074298 | UniProt:C5YQV6 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlants:EES17294 | ProteinID:EES17294 | ProteinID:EES17294.1 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | PFAM:PF00134 | PFAM:PF02984 | PANTHER:PTHR10177 |
| PANTHER:PTHR10177:SF225 | SMART:SM00385 | EnsemblPlantsGene:SORBI_3008G147500 | SUPFAM:SSF47954 | unigene:Sbi.11653 | UniParc:UPI0001A880CE |
| RefSeq:XP_002443456.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:58110039..58112954
Molecular Weight (calculated)
39009.7 Da
IEP (calculated)
4.336
GRAVY (calculated)
-0.029
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPVEAAAAA AADDWSECAF SLTCEEDCAD LGDGVVDDGE FFPLYNAGDE EEEEYLEQLV FKETSFCSSS SDSGADCDGD GDGDGEGDEE YPSLASEEWF
101: RQARLAAVKW ILETRGCFGF GHRTAYLAIA YFDSFLLRRR VDREAMPWAA QLLSVACVSV AAKMEECQVP ALSEFHAGGY DFDSASIRRM ELLVLSTLGW
201: RMRAVTPFDF LPCFSSRVHP HGGAGAGAGG HVALKAIGFI FATAEAGSVL DHRPSTVAAA AILAATYGPL LTKEALGSKM SYLSPSCLIE KEHVHACYSM
301: MVGDMNRRGS KRSLPCSGTN EIATSTYDSV LVDDDVTDTA AAAIATVVAA RNKRIRLELT GIR
101: RQARLAAVKW ILETRGCFGF GHRTAYLAIA YFDSFLLRRR VDREAMPWAA QLLSVACVSV AAKMEECQVP ALSEFHAGGY DFDSASIRRM ELLVLSTLGW
201: RMRAVTPFDF LPCFSSRVHP HGGAGAGAGG HVALKAIGFI FATAEAGSVL DHRPSTVAAA AILAATYGPL LTKEALGSKM SYLSPSCLIE KEHVHACYSM
301: MVGDMNRRGS KRSLPCSGTN EIATSTYDSV LVDDDVTDTA AAAIATVVAA RNKRIRLELT GIR
001: MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
101: DLFLHKRFIG LQKDETWAMR LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY FNYFLAKISQ DNHSVSKDLV
201: LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
301: AKRRLSFDDS DQSSPPAKRM RRL
Arabidopsis Description
CYCD5-1Cyclin-D5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.