CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022175_P001	Maize	nucleus	82.61	75.6
TraesCS2D01G171700.1	Wheat	nucleus	64.64	65.2
TraesCS2B01G190700.1	Wheat	nucleus	64.35	64.53
TraesCS2A01G164800.1	Wheat	nucleus	64.06	64.06
Os07t0620800-01	Rice	nucleus	65.51	63.48
OQU92473	Sorghum	nucleus	47.83	47.69
EES07560	Sorghum	nucleus	46.96	45.25
EER96886	Sorghum	nucleus	46.38	42.33
EES14027	Sorghum	nucleus	44.06	40.75
KXG19603	Sorghum	nucleus	39.42	39.08
HORVU2Hr1G030130.1	Barley	plastid	50.72	38.21
OQU89443	Sorghum	nucleus	29.86	30.93
EER99528	Sorghum	cytosol	24.64	27.07
EES17294	Sorghum	nucleus	26.38	25.07
EER91226	Sorghum	nucleus	26.38	24.59
EER92677	Sorghum	nucleus	24.64	23.94
EER96424	Sorghum	cytosol	24.06	21.73
OQU84124	Sorghum	nucleus	25.51	20.61

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	EntrezGene:8061553	UniProt:C5X2G5	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_C-dom	InterPro:Cyclin_N	EnsemblPlants:EER97558	ProteinID:EER97558	ProteinID:EER97558.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	ProteinID:OQU90277.1	PFAM:PF00134	PFAM:PF02984
PIRSF:PIRSF001771	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF235	SMART:SM00385	SMART:SM01332
EnsemblPlantsGene:SORBI_3002G378600	SUPFAM:SSF47954	unigene:Sbi.16207	UniParc:UPI0001A8393C	RefSeq:XP_002461037.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:73486577..73489045

Molecular Weight (calculated)

37887.4 Da

IEP (calculated)

4.988

GRAVY (calculated)

0.005

Length

345 amino acids

Sequence
(BLAST)

001: MGIVCVDASS TLLCEEDRSN ALGLVGCCDE LLEVGSGLDG LDSADGAVLP VHTDEAVSAL VEKEMDHQPQ EGYAERLERG GLESSWRRDA MDWICKVHSH
101: YSFAPLSLYL AVNYLDRFLS LYELPHDKPW MQQLLSVACL SLAVKMEETV VPFPVDLQVC DVKFEFEGKT IGRMEVLVLK TLKWRMQAVT PFTFISYFLD
201: KFSDGKPPSF ALSSRCAEII IGTLKGSTFL SFRPSEIAAA SALAVVSENQ IVGFASVLSA SKVPVNKDMV ARCYELLQEQ VLVKKRRHIN GSASVPQSPI
301: GVLDATCFSF RSEDATLGSS QSNNISSSDN NNQASKRRRL SISPI

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.