Factsheet for TraesCS2D01G171700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G164800.1	Wheat	nucleus	97.37	96.52
TraesCS2B01G190700.1	Wheat	nucleus	97.08	96.51
Os07t0620800-01	Rice	nucleus	70.47	67.7
EER97558	Sorghum	nucleus	65.2	64.64
Zm00001d022175_P001	Maize	nucleus	66.37	60.21
HORVU2Hr1G030130.1	Barley	plastid	70.47	52.62
TraesCS5D01G253200.1	Wheat	nucleus	40.94	39.33
TraesCS6D01G294200.1	Wheat	nucleus	28.66	38.89
TraesCS5D01G253500.1	Wheat	nucleus	39.77	37.57
TraesCS5D01G206200.1	Wheat	nucleus	32.16	29.97
TraesCS2D01G215000.3	Wheat	cytosol, nucleus, plasma membrane	23.39	25.56
TraesCS4D01G135100.1	Wheat	cytosol, nucleus, plastid	24.85	25.22
TraesCS5D01G165900.1	Wheat	cytosol	25.73	24.86
TraesCS4D01G079400.1	Wheat	cytosol	24.27	24.63
TraesCS5D01G080600.1	Wheat	nucleus	24.27	23.58
TraesCS4D01G257800.1	Wheat	cytosol, nucleus, plastid	23.1	22.97

Protein Annotations

EnsemblPlants:TraesCS2D01G171700.1	EnsemblPlantsGene:TraesCS2D01G171700	Gene3D:1.10.472.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	PANTHER:PTHR10177
PANTHER:PTHR10177:SF235	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292	SEG:seg
SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	TIGR:cd00043	MapMan:13.1.1.1.4	:

Description

No Description!

Coordinates

chr2D:-:115625020..115627197

Molecular Weight (calculated)

37336.9 Da

IEP (calculated)

5.675

GRAVY (calculated)

0.043

Length

342 amino acids

Sequence
(BLAST)

001: MGILCFGASS TLLCGEDSNS ALGLGVCGGG GEVAGAGGGL GFLDVGAVFP VDSDEIMRAL VEKEMDHRPK GGYVERLGHG GFESSWRKDA MDWICKVHSH
101: YNFGPLTLCL SVNYMDRFLS SFDLPHDKSW MQQLMSVACL SLAVKMEETV APLPVDLQVC DEYYAFEPRN IKRMELVVME TLKWRMHSVT PFSFLCYFLD
201: KFNEGKPPSY MLVSRCAELI VATVKDYRFL SFRPSEIAAA VVLWVLAENQ VISFSSALAA SEIPVNKEMI AGCYALLVKK RGNFSASLSA PLSPIGVLDV
301: PCFSFRNDDT TPGSSPSNNN SSSNDQASTP ASKRRRLSAS PI

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.