Factsheet for Zm00001d022175_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97558	Sorghum	nucleus	75.6	82.61
TraesCS2B01G190700.1	Wheat	nucleus	61.54	67.44
TraesCS2A01G164800.1	Wheat	nucleus	60.74	66.38
TraesCS2D01G171700.1	Wheat	nucleus	60.21	66.37
Os07t0620800-01	Rice	nucleus	59.95	63.48
Zm00001d029407_P001	Maize	nucleus	43.24	47.11
Zm00001d018128_P001	Maize	nucleus	41.64	44.23
Zm00001d052185_P001	Maize	nucleus	40.85	42.78
Zm00001d005928_P002	Maize	nucleus	38.99	40.72
Zm00001d050475_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	31.83	38.84
HORVU2Hr1G030130.1	Barley	plastid	46.95	38.65
Zm00001d044984_P001	Maize	mitochondrion	26.79	36.59
Zm00001d049334_P001	Maize	mitochondrion	25.46	32.88
Zm00001d031837_P001	Maize	nucleus	36.87	32.78
Zm00001d038580_P001	Maize	plastid	25.46	28.83
Zm00001d021745_P001	Maize	cytosol, nucleus, plastid	23.08	28.34
Zm00001d048143_P003	Maize	nucleus, peroxisome, plastid	24.67	26.35
Zm00001d020353_P001	Maize	nucleus	22.81	25.98
Zm00001d030894_P002	Maize	nucleus	23.61	25.8
Zm00001d041345_P001	Maize	cytosol	23.61	25.5
Zm00001d013728_P001	Maize	cytosol	23.61	24.38
Zm00001d033330_P001	Maize	nucleus	22.81	24.29
Zm00001d019696_P001	Maize	cytosol	23.61	23.0
Zm00001d005293_P001	Maize	cytosol	22.55	21.74
Zm00001d028092_P001	Maize	cytosol	14.85	20.59
Zm00001d048594_P001	Maize	cytosol	22.28	19.76
Zm00001d003439_P001	Maize	plastid	6.1	18.11

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	UniProt:A0A1D6IJX5	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom
InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	ProteinID:ONM59731.1
PFAM:PF00134	PFAM:PF02984	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF235	SMART:SM00385
SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0008432332	EnsemblPlantsGene:Zm00001d022175	EnsemblPlants:Zm00001d022175_P001	EnsemblPlants:Zm00001d022175_T001
SEG:seg	:	:	:	:	:

Description

Cyclin-D2-1

Coordinates

chr7:+:171734663..171736968

Molecular Weight (calculated)

41047.2 Da

IEP (calculated)

6.251

GRAVY (calculated)

0.053

Length

377 amino acids

Sequence
(BLAST)

001: MGILCLGASS TLLCGEDRNN VLGLGCGNEL VEVGSGHDGL DSVVGAVFPV DTDEAVRALL EKETDHKPQD GYAERLERGG LEYSWRRDAM DWICKVHSYY
101: RFGPLSLYLA VNYLDRFLSS YDLPHDKPWM RQLLSVACLA LAVKMEETVL PLPVDLQVCD VKFEFEARTI GRMELLVLAT LKWRMQAVTP FTFISYFLDK
201: FNGGKPPSLA LASRCTDIII GTLKGSIGSF RAAHRLFNSL ACIADGAMFG CAYGFTGSTF LSFRPSEIAA ASALAAVSEN QVVGSSSALS ASEVPINKVM
301: IARCYELLQE QALVRKTGHV NGSPSVPQSP IGVLDATCFS FRSEDARLVS SQSNNISSSS SNDNQVSKRR RLSISPI

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.