Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, nucleus, vacuole, golgi, plastid, cytosol, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plasma membrane 2
- vacuole 2
- golgi 2
- extracellular 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14027 | Sorghum | nucleus | 88.67 | 73.46 |
| Zm00001d031837_P001 | Maize | nucleus | 83.17 | 60.61 |
| Os08t0479300-01 | Rice | nucleus | 66.67 | 53.79 |
| Zm00001d005928_P002 | Maize | nucleus | 61.49 | 52.63 |
| Zm00001d052185_P001 | Maize | nucleus | 49.84 | 42.78 |
| Zm00001d018128_P001 | Maize | nucleus | 48.54 | 42.25 |
| Zm00001d029407_P001 | Maize | nucleus | 36.25 | 32.37 |
| Zm00001d022175_P001 | Maize | nucleus | 38.84 | 31.83 |
| Zm00001d044984_P001 | Maize | mitochondrion | 25.89 | 28.99 |
| Zm00001d049334_P001 | Maize | mitochondrion | 24.6 | 26.03 |
| Zm00001d021745_P001 | Maize | cytosol, nucleus, plastid | 22.98 | 23.13 |
| Zm00001d038580_P001 | Maize | plastid | 24.92 | 23.12 |
| Zm00001d041345_P001 | Maize | cytosol | 25.24 | 22.35 |
| Zm00001d019696_P001 | Maize | cytosol | 27.83 | 22.22 |
| Zm00001d048143_P003 | Maize | nucleus, peroxisome, plastid | 24.92 | 21.81 |
| Zm00001d030894_P002 | Maize | nucleus | 24.27 | 21.74 |
| Zm00001d033330_P001 | Maize | nucleus | 23.95 | 20.9 |
| Zm00001d020353_P001 | Maize | nucleus | 21.68 | 20.24 |
| Zm00001d005293_P001 | Maize | cytosol | 25.57 | 20.2 |
| Zm00001d013728_P001 | Maize | cytosol | 23.62 | 20.0 |
| Zm00001d048594_P001 | Maize | cytosol | 20.71 | 15.06 |
| Zm00001d003439_P001 | Maize | plastid | 6.15 | 14.96 |
| Zm00001d028092_P001 | Maize | cytosol | 12.95 | 14.71 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | UniProt:A0A1D6Q1T2 | ProteinID:AQK52573.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF339 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0008445863 | EnsemblPlantsGene:Zm00001d050475 | EnsemblPlants:Zm00001d050475_P001 | EnsemblPlants:Zm00001d050475_T001 | SEG:seg |
Description
Cyclin-D2-1
Coordinates
chr4:-:91278970..91282052
Molecular Weight (calculated)
33400.7 Da
IEP (calculated)
4.611
GRAVY (calculated)
-0.056
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSCYDVAA SMLLCAEEHS SILCFEEEEE ELEAVGRKRG RSPGYGDDFG VDLFPPQTEE CVAGLVERER EHMPRADYGQ RLRGDGVDLC VRQEAIDCIW
101: KEGKGWMTQL LSVACVSLAA KMEETAVPQC LDLQVGDARF VFEAKTIQRM ELLVLTTLNW RMQAVTPFSY VDYFLNRLSG GNAALRNCLF QSAELILCAA
201: RGTSCIGFRP SEIAAAVAAA VVGEVDVAGI ENACAHVDKE RVLRCQEAIQ SMAFPVPVPQ SPVGVLDAGY LSYKSEDDAA AAATAASHGA SGSSSSSPVT
301: SKRRKLTSR
101: KEGKGWMTQL LSVACVSLAA KMEETAVPQC LDLQVGDARF VFEAKTIQRM ELLVLTTLNW RMQAVTPFSY VDYFLNRLSG GNAALRNCLF QSAELILCAA
201: RGTSCIGFRP SEIAAAVAAA VVGEVDVAGI ENACAHVDKE RVLRCQEAIQ SMAFPVPVPQ SPVGVLDAGY LSYKSEDDAA AAATAASHGA SGSSSSSPVT
301: SKRRKLTSR
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.