Factsheet for Zm00001d050475_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid

Predictor Summary:

nucleus 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14027	Sorghum	nucleus	88.67	73.46
Zm00001d031837_P001	Maize	nucleus	83.17	60.61
Os08t0479300-01	Rice	nucleus	66.67	53.79
Zm00001d005928_P002	Maize	nucleus	61.49	52.63
Zm00001d052185_P001	Maize	nucleus	49.84	42.78
Zm00001d018128_P001	Maize	nucleus	48.54	42.25
Zm00001d029407_P001	Maize	nucleus	36.25	32.37
Zm00001d022175_P001	Maize	nucleus	38.84	31.83
Zm00001d044984_P001	Maize	mitochondrion	25.89	28.99
Zm00001d049334_P001	Maize	mitochondrion	24.6	26.03
Zm00001d021745_P001	Maize	cytosol, nucleus, plastid	22.98	23.13
Zm00001d038580_P001	Maize	plastid	24.92	23.12
Zm00001d041345_P001	Maize	cytosol	25.24	22.35
Zm00001d019696_P001	Maize	cytosol	27.83	22.22
Zm00001d048143_P003	Maize	nucleus, peroxisome, plastid	24.92	21.81
Zm00001d030894_P002	Maize	nucleus	24.27	21.74
Zm00001d033330_P001	Maize	nucleus	23.95	20.9
Zm00001d020353_P001	Maize	nucleus	21.68	20.24
Zm00001d005293_P001	Maize	cytosol	25.57	20.2
Zm00001d013728_P001	Maize	cytosol	23.62	20.0
Zm00001d048594_P001	Maize	cytosol	20.71	15.06
Zm00001d003439_P001	Maize	plastid	6.15	14.96
Zm00001d028092_P001	Maize	cytosol	12.95	14.71

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	UniProt:A0A1D6Q1T2	ProteinID:AQK52573.1	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	PANTHER:PTHR10177	PANTHER:PTHR10177:SF339	SMART:SM01332
SUPFAM:SSF47954	UniParc:UPI0008445863	EnsemblPlantsGene:Zm00001d050475	EnsemblPlants:Zm00001d050475_P001	EnsemblPlants:Zm00001d050475_T001	SEG:seg

Description

Cyclin-D2-1

Coordinates

chr4:-:91278970..91282052

Molecular Weight (calculated)

33400.7 Da

IEP (calculated)

4.611

GRAVY (calculated)

-0.056

Length

309 amino acids

Sequence
(BLAST)

001: MAPSCYDVAA SMLLCAEEHS SILCFEEEEE ELEAVGRKRG RSPGYGDDFG VDLFPPQTEE CVAGLVERER EHMPRADYGQ RLRGDGVDLC VRQEAIDCIW
101: KEGKGWMTQL LSVACVSLAA KMEETAVPQC LDLQVGDARF VFEAKTIQRM ELLVLTTLNW RMQAVTPFSY VDYFLNRLSG GNAALRNCLF QSAELILCAA
201: RGTSCIGFRP SEIAAAVAAA VVGEVDVAGI ENACAHVDKE RVLRCQEAIQ SMAFPVPVPQ SPVGVLDAGY LSYKSEDDAA AAATAASHGA SGSSSSSPVT
301: SKRRKLTSR

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.