Factsheet for Zm00001d031837_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050475_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	60.61	83.17
EES14027	Sorghum	nucleus	68.16	77.48
Os08t0479300-01	Rice	nucleus	53.54	59.27
Zm00001d005928_P002	Maize	nucleus	50.24	59.0
Zm00001d052185_P001	Maize	nucleus	40.8	48.06
Zm00001d018128_P001	Maize	nucleus	40.09	47.89
Zm00001d029407_P001	Maize	nucleus	31.6	38.73
Zm00001d022175_P001	Maize	nucleus	32.78	36.87
Zm00001d044984_P001	Maize	mitochondrion	20.52	31.52
Zm00001d020353_P001	Maize	nucleus	21.7	27.79
Zm00001d049334_P001	Maize	mitochondrion	19.1	27.74
Zm00001d021745_P001	Maize	cytosol, nucleus, plastid	19.58	27.04
Zm00001d019696_P001	Maize	cytosol	24.53	26.87
Zm00001d005293_P001	Maize	cytosol	24.76	26.85
Zm00001d041345_P001	Maize	cytosol	21.23	25.79
Zm00001d048143_P003	Maize	nucleus, peroxisome, plastid	21.46	25.78
Zm00001d038580_P001	Maize	plastid	19.34	24.62
Zm00001d033330_P001	Maize	nucleus	20.52	24.58
Zm00001d013728_P001	Maize	cytosol	20.99	24.38
Zm00001d030894_P002	Maize	nucleus	19.34	23.77
Zm00001d028092_P001	Maize	cytosol	12.5	19.49
Zm00001d048594_P001	Maize	cytosol	18.87	18.82
Zm00001d003439_P001	Maize	plastid	4.25	14.17

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	UniProt:A0A1D6KLI3	ncoils:Coil	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
ProteinID:ONM03750.1	PFAM:PF00134	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF339	SMART:SM00385
SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI000844060A	EnsemblPlantsGene:Zm00001d031837	EnsemblPlants:Zm00001d031837_P001	EnsemblPlants:Zm00001d031837_T001
SEG:seg	:	:	:	:	:

Description

Cyclin-D2-1

Coordinates

chr1:+:203221978..203225256

Molecular Weight (calculated)

45787.2 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.185

Length

424 amino acids

Sequence
(BLAST)

001: MAPSCYDAAA SMLLCAEEHS SILWYDEEEE ELEAVGRRRG RSPGYGDDFG ADLFPPQSEE CVAGLVERER DHMPGPCYGD RLRGGGGCLC VRREAVDWIW
101: KAYTHHRFRP LTAYLAVNYL DRFLSLSEVP DCKDWMTQLL AVACVSLAAK MEETAVPQCL DLQEVGVRLF GIAAKMHTFS LSLSLSLSLS CSCMCNNNKQ
201: VGDARYVFEA KTVQRMELLV LTTLNWRMHA VTPFSYVDYF LNKLNNGGST APRSCWLLQS AELILRAARG TGCVGFRPSE IAAAVAAAVA GDVDDADGVE
301: NACCAHVDKE RVLRCQEAIG SMASSAAIDD ATVPPKSARR RSSPVPVPQS PVGVLDAAPC LSYRSEEAAT ATATATSAAS HGAPGSSSSS STSPVTSKRR
401: KLASRCDGSC SDRSKRAPAQ WTKE

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.