Factsheet for TraesCS2A01G164800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G190700.1	Wheat	nucleus	97.39	97.67
TraesCS2D01G171700.1	Wheat	nucleus	96.52	97.37
Os07t0620800-01	Rice	nucleus	70.14	67.98
EER97558	Sorghum	nucleus	64.06	64.06
Zm00001d022175_P001	Maize	nucleus	66.38	60.74
HORVU2Hr1G030130.1	Barley	plastid	70.43	53.06
TraesCS6A01G314900.1	Wheat	nucleus	45.51	43.85
TraesCS5A01G246800.1	Wheat	nucleus	39.42	38.53
TraesCS5A01G247000.1	Wheat	nucleus	38.55	37.46
TraesCS5A01G200500.2	Wheat	nucleus	31.88	33.95
TraesCS4A01G234600.1	Wheat	cytosol	24.93	25.52
TraesCS4A01G177400.1	Wheat	cytosol	24.35	25.23
TraesCS2A01G208300.1	Wheat	nucleus, peroxisome, plasma membrane	22.61	25.16
TraesCS5A01G161000.1	Wheat	cytosol	25.22	24.58
TraesCS5A01G068600.1	Wheat	nucleus	24.35	23.93
TraesCS4A01G046900.1	Wheat	nucleus	24.06	23.65
TraesCS7A01G479000.1	Wheat	cytosol, nucleus, plastid	5.51	15.83

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	PFAM:PF00134	PFAM:PF02984
PIRSF:PIRSF001771	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF235	SMART:SM00385	SMART:SM01332
SUPFAM:SSF47954	EnsemblPlantsGene:TraesCS2A01G164800	EnsemblPlants:TraesCS2A01G164800.1	TIGR:cd00043	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:117180787..117182504

Molecular Weight (calculated)

37588.1 Da

IEP (calculated)

5.680

GRAVY (calculated)

0.005

Length

345 amino acids

Sequence
(BLAST)

001: MGILCFGASS TLLCGEDSNS VLGLGGCGGG GGDGEVAGAG RGLGFLDVGA VFPVDSDEVM RALVEKEVDH RPKGGYVERL GHGGFESSWR KDAMDWICKV
101: HSHYNFGPLT LCLSVNYMDR FLSSFDLPHD KSWMQQLMSV ACLSLAVKME ETVAPLPVDL QVCDEYYAFE PRNIKRMELI VMETLKWRMH SVTPFSFLCY
201: FLDKFNEGKP PSYMLVSRCA ELIVATVKDY RFLSFRPSEI AAAVVLWALA ENQVIGFSSA LAASEIPVNK EMIAGCYALL VKKRGNFSAS LSAPLSPIGV
301: LDVPCFSFRN DDTTPGSSPS NNNSNSNDQA STPASKRRRL SASPI

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.