Factsheet for HORVU2Hr1G030130.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G171700.1	Wheat	nucleus	52.62	70.47
TraesCS2A01G164800.1	Wheat	nucleus	53.06	70.43
TraesCS2B01G190700.1	Wheat	nucleus	52.84	70.35
Os07t0620800-01	Rice	nucleus	40.83	52.53
EER97558	Sorghum	nucleus	38.21	50.72
Zm00001d022175_P001	Maize	nucleus	38.65	46.95
HORVU6Hr1G077500.1	Barley	nucleus	27.95	36.47
HORVU0Hr1G013250.1	Barley	cytosol	15.72	33.64
HORVU7Hr1G033350.3	Barley	cytosol	17.25	26.25
HORVU0Hr1G003280.5	Barley	cytosol, mitochondrion, nucleus	13.97	25.5
HORVU5Hr1G059770.2	Barley	nucleus	19.87	25.49
HORVU5Hr1G050270.8	Barley	cytosol	16.81	21.94
HORVU5Hr1G018180.1	Barley	nucleus	15.72	20.63
HORVU4Hr1G013700.2	Barley	plastid	16.38	18.99
HORVU7Hr1G117300.3	Barley	cytosol	4.8	13.33

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	UniProt:A0A287HJB4	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom
InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:HORVU2Hr1G030130
EnsemblPlants:HORVU2Hr1G030130.1	PFAM:PF00134	PFAM:PF02984	PANTHER:PTHR10177	PANTHER:PTHR10177:SF235	SMART:SM00385
SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI000B487706	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:110192249..110194150

Molecular Weight (calculated)

40547.7 Da

IEP (calculated)

9.743

GRAVY (calculated)

-0.262

Length

458 amino acids

Sequence
(BLAST)

001: MIISHLKTAH PIKLPKPSPL SLPQETHPHL VASFFPFATS QDTRRYRGER SGAFSSIGAS LSRPQPREKS SHHSGPPKTK SQDRAPWCHQ RQRRREPAGG
101: GRVESRRTPA GRRLPGDLEM GILCFGASST XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXLCLSV NYMDRFLSSF DLPHDKSWMQ QLMSVACLSL AVKMEETVAP LPVDLQVCDA SYEFEPRNIK RMELIVMETL
301: KWRMHSVTPF SFLCYFLDKF NQGKPPSYML VSRCAELIVA TVKDYRFLSF RPSEIAAAVV LWALTENQVI GFSSTLAASE IPVNKEMIAR CYELLVKKRG
401: NFSASLSAPL SPIGVLDVAC FSFRNDDEGH APSNNNSSNN DQASTPASKR RRLSTSPI

Best Arabidopsis Sequence Match ( AT5G65420.1 )
(BLAST)

001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKACE VHQFGPLCFC
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA CCFSFKTHDS
301: SSSYTHLS

Arabidopsis Description

CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.