Factsheet for Os07t0620800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
nucleus 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G190700.1	Wheat	nucleus	68.54	70.93
TraesCS2D01G171700.1	Wheat	nucleus	67.7	70.47
TraesCS2A01G164800.1	Wheat	nucleus	67.98	70.14
EER97558	Sorghum	nucleus	63.48	65.51
Zm00001d022175_P001	Maize	nucleus	63.48	59.95
Os03t0392000-00	Rice	cytosol, nucleus, plastid	33.71	48.78
Os09t0466100-01	Rice	nucleus	44.1	44.1
HORVU2Hr1G030130.1	Barley	plastid	52.53	40.83
Os08t0479300-01	Rice	nucleus	42.13	39.16
Os09t0382300-00	Rice	nucleus	29.49	34.09
Os11t0706801-00	Rice	nucleus	23.88	26.56
Os07t0556000-01	Rice	cytosol	23.88	26.56
Os06t0236600-00	Rice	nucleus	25.84	25.34
Os12t0588800-01	Rice	nucleus	24.16	23.56
Os03t0203800-01	Rice	nucleus	22.47	23.19
Os03t0617500-01	Rice	cytosol, nucleus	24.16	22.87
Os09t0111100-01	Rice	cytosol	23.31	22.8

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	EntrezGene:4343936	EMBL:AK063671	ProteinID:BAC10182.1	ProteinID:BAF22218.1
ProteinID:BAT02694.1	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	ProteinID:EAZ40692.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007049	GO:GO:0008150
GO:GO:0009987	GO:GO:0051301	EnsemblPlantsGene:Os07g0620800	EnsemblPlants:Os07t0620800-01	PFAM:PF00134	PFAM:PF02984
PIRSF:PIRSF001771	ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF235	UniProt:Q8LHA8	SMART:SM00385
SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI00000A829D	RefSeq:XP_015645531.1	SEG:seg	:

Description

D-TYPE CYCLIN 2;1Cyclin, A/B/D/E domain containing protein. (Os07t0620800-01)

Coordinates

chr7:-:25662908..25665316

Molecular Weight (calculated)

39178.8 Da

IEP (calculated)

4.793

GRAVY (calculated)

0.007

Length

356 amino acids

Sequence
(BLAST)

001: MGVLCFGASN ILLCAEDSSS VLGLGGFGGG GGEVAAELGC GGGGGFDFFG FGGGAVFPID SDEFVALLVE KEMDHQPQRG YLEKLELGGL ECSWRKDAID
101: WICKVHSYYN FGPLSLYLAV NYLDRFLSSF NLPHDESWMQ QLLSVSCLSL ATKMEETVVP LPMDLQVFDA EYVFEARHIK RMELIVMKTL KWRLQAVTPF
201: SFIGYFLDKF NEGKPPSYTL ASWCSDLTVG TLKDSRFLSF RPSEIAAAVV LAVLAENQFL VFNSALGESE IPVNKEMVMR CYELMVEKAL VKKIRNSNAS
301: SSVPHSPITV LDAACFSFRS DDTTLGSSQS NSNNKDYNSQ DSAPASKRRR LNTTPI

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.