Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92473 | Sorghum | nucleus | 48.78 | 34.68 |
| Zm00001d029407_P001 | Maize | nucleus | 48.78 | 34.68 |
| Os07t0620800-01 | Rice | nucleus | 48.78 | 33.71 |
| Os09t0466100-01 | Rice | nucleus | 43.5 | 30.06 |
| Os08t0479300-01 | Rice | nucleus | 43.09 | 27.68 |
| Os09t0382300-00 | Rice | nucleus | 33.33 | 26.62 |
| Zm00001d044984_P001 | Maize | mitochondrion | 24.8 | 22.1 |
| Os06t0236600-00 | Rice | nucleus | 30.49 | 20.66 |
| Os12t0588800-01 | Rice | nucleus | 29.27 | 19.73 |
| Os03t0203800-01 | Rice | nucleus | 27.64 | 19.71 |
| Zm00001d038580_P001 | Maize | plastid | 25.61 | 18.92 |
| Zm00001d049334_P001 | Maize | mitochondrion | 22.36 | 18.84 |
| Os09t0111100-01 | Rice | cytosol | 27.64 | 18.68 |
| Os03t0617500-01 | Rice | cytosol, nucleus | 28.05 | 18.35 |
| Os07t0556000-01 | Rice | cytosol | 22.36 | 17.19 |
| Os11t0706801-00 | Rice | nucleus | 22.36 | 17.19 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | UniProt:A0A0P0VYB0 | ProteinID:BAS84528.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051301 | EnsemblPlantsGene:Os03g0392000 | EnsemblPlants:Os03t0392000-00 | PFAM:PF00134 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF207 | SMART:SM00385 | SUPFAM:SSF47954 |
| UniParc:UPI0003938C70 | SEG:seg | : | : | : | : |
Description
CYCLIN-D2-3Cyclin, N-terminal domain containing protein. (Os03t0392000-00)
Coordinates
chr3:-:15730494..15732159
Molecular Weight (calculated)
27113.6 Da
IEP (calculated)
4.276
GRAVY (calculated)
0.060
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLCRRRSS AAPAESFSLL CEEDSESVFG SDDDGVEETA TMAPELGKMM SLGFSASHHL GDGGGGGEEL VGSFMEKEVE QMVETARGEY LTKLSNGGIE
101: LSCRIAAIDW ICKVQAYYSF GPLCAYLAVN YLDRFLSSVE FSNDMPWMQQ LLIVACLSLA AKMEETAAPG TLDLQVCNPE YVFDAETIHR MEIIVLTTLK
201: WRMQAVTPFT YIGHFLDKIN EGNRITSELI SRCTEIILST MKGLCS
101: LSCRIAAIDW ICKVQAYYSF GPLCAYLAVN YLDRFLSSVE FSNDMPWMQQ LLIVACLSLA AKMEETAAPG TLDLQVCNPE YVFDAETIHR MEIIVLTTLK
201: WRMQAVTPFT YIGHFLDKIN EGNRITSELI SRCTEIILST MKGLCS
001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQQERV KRCLNLMRSL TGEENVRGTS
301: LSQEQARVAV RAVPASPVGV LEATCLSYRS EERTVESCTN SSQSSPDNNN NNNNSNKRRR KQ
Arabidopsis Description
CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.