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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90152 cytosol, nucleus
EER90164
EER90466
EER91182
EER91226 nucleus
EER91497 nucleus, nucleus
EER92677 nucleus
EER93410
EER93574
EER94473
EER95293
EER95303 nucleus, nucleus
EER95545 nucleus, nucleus
EER96424 nucleus, nucleus
EER99015 nucleus
EER99528 nucleus
EER99914
EES02793 cytosol, cytosol
EES03220
EES03772 cytosol, cytosol
EES04403 cytosol, nucleus
EES04513
EES04615
EES07560 cytosol, nucleus
EES07835
EES11025
EES11236
EES12270
EES12591
EES12664 endoplasmic reticulum, nucleus
EES13525
EES13543
EES14166 nucleus
EES15493
EES15619 cytosol, nucleus
EES16237 nucleus, nucleus
EES17034
EES17294 nucleus
EES18176 nucleus, nucleus, nucleus
EES18429 cytosol, cytosol
EES19072
EES19317
EES19865
KXG19603 cytosol, nucleus
KXG20945 endoplasmic reticulum, nucleus
KXG21076 nucleus
KXG21616 nucleus
KXG23504 nucleus, nucleus, nucleus, nucleus
KXG24389 cytosol, cytosol
KXG26019 nucleus
KXG26586
KXG27072
KXG29416 nucleus
KXG37519
KXG38049
KXG39890
KXG40187 cytosol, cytosol, cytosol, cytosol, nucleus, nucleus, nucleus, nucleus
KXG40336 cytosol, nucleus
OQU77084 nucleus, nucleus, nucleus, nucleus
OQU80908 cytosol, nucleus
OQU82384
OQU83580 nucleus
OQU85258
OQU85741
OQU89443 nucleus
OQU91386 nucleus, nucleus
OQU92050 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48750.1 KXG29416 AT1G02970.1 17209125
AT3G48750.1 KXG29416 AT1G02970.1 20407024
AT3G48750.1 EER93410 AT1G14810.1 20706207
AT3G48750.1 KXG23504 AT1G15570.1 20018602
AT3G48750.1 OQU77084 AT1G15570.1 20018602
AT3G48750.1 KXG23504 AT1G15570.1 20407024
AT3G48750.1 OQU77084 AT1G15570.1 20407024
AT3G48750.1 EES18176 AT1G18040.1 20407024
AT3G48750.1 EES12664 AT1G20610.1 20018602
AT3G48750.1 KXG20945 AT1G20610.1 20018602
AT3G48750.1 EES12664 AT1G20610.1 20407024
AT3G48750.1 KXG20945 AT1G20610.1 20407024
AT3G48750.1 EER93574 AT1G23190.1 17426018
AT3G48750.1 EER93574 AT1G23190.1 20706207
AT3G48750.1 EER95293 AT1G26570.1 20706207
AT3G48750.1 KXG37519 AT1G26570.1 20706207
AT3G48750.1 KXG38049 AT1G26570.1 20706207
AT3G48750.1 KXG21616 AT1G44110.1 20407024
AT3G48750.1 EES11025 AT1G51540.1 20706207
AT3G48750.1 EES13525 AT1G64520.1 17426018
AT3G48750.1 EES18176 AT1G66750.1 20407024
AT3G48750.1 OQU89443 AT1G70210.1 12857813
AT3G48750.1 OQU89443 AT1G70210.1 20407024
AT3G48750.1 EES18176 AT1G73690.1 20407024
AT3G48750.1 EER90152 AT1G76540.1 10420643
AT3G48750.1 OQU80908 AT1G76540.1 10420643
AT3G48750.1 EER90152 AT1G76540.1 20407024
AT3G48750.1 OQU80908 AT1G76540.1 20407024
AT3G48750.1 EER90152 AT1G76540.1 20407024
AT3G48750.1 OQU80908 AT1G76540.1 20407024
AT3G48750.1 EER90164 AT1G78900.1 17426018
AT3G48750.1 EES04615 AT1G78900.1 17426018
AT3G48750.1 KXG23504 AT1G80370.1 20018602
AT3G48750.1 OQU77084 AT1G80370.1 20018602
AT3G48750.1 KXG23504 AT1G80370.1 20407024
AT3G48750.1 OQU77084 AT1G80370.1 20407024
AT3G48750.1 EES04513 AT2G20580.1 17426018
AT3G48750.1 KXG40187 AT2G27960.1 11432958
AT3G48750.1 KXG40187 AT2G27960.1 11449057
AT3G48750.1 KXG40187 AT2G27960.1 17426018
AT3G48750.1 KXG40187 AT2G27960.1 20018602
AT3G48750.1 KXG40187 AT2G27960.1 20018602
AT3G48750.1 KXG40187 AT2G27960.1 20407024
AT3G48750.1 KXG40187 AT2G27960.1 20407024
AT3G48750.1 KXG40187 AT2G27960.1 9276444
AT3G48750.1 KXG40187 AT2G27970.1 17426018
AT3G48750.1 KXG40187 AT2G27970.1 20018602
AT3G48750.1 KXG40187 AT2G27970.1 20018602
AT3G48750.1 KXG40187 AT2G27970.1 20407024
AT3G48750.1 KXG40187 AT2G27970.1 20407024
AT3G48750.1 KXG40187 AT2G27970.1 20706207
AT3G48750.1 EER90466 AT2G28000.1 17426018
AT3G48750.1 EES19317 AT2G28000.1 17426018
AT3G48750.1 EER99914 AT2G30470.1 20706207
AT3G48750.1 EER91497 AT2G32710.1 11449057
AT3G48750.1 EER95545 AT2G32710.1 11449057
AT3G48750.1 EER91497 AT2G32710.1 17426018
AT3G48750.1 EER95545 AT2G32710.1 17426018
AT3G48750.1 EER91497 AT2G32710.1 20018602
AT3G48750.1 EER95545 AT2G32710.1 20018602
AT3G48750.1 EER91497 AT2G32710.1 20407024
AT3G48750.1 EER95545 AT2G32710.1 20407024
AT3G48750.1 EES13543 AT2G32730.1 20706207
AT3G48750.1 KXG27072 AT2G32730.1 20706207
AT3G48750.1 EER94473 AT2G44740.1 15197472
AT3G48750.1 EES12591 AT2G44740.1 15197472
AT3G48750.1 OQU85741 AT2G44740.1 15197472
AT3G48750.1 EES11236 AT2G45080.1 15197472
AT3G48750.1 EES17034 AT3G04620.1 20706207
AT3G48750.1 EES14166 AT3G12280.1 20407024
AT3G48750.1 KXG21076 AT3G12280.1 20407024
AT3G48750.1 KXG26019 AT3G12280.1 20407024
AT3G48750.1 OQU83580 AT3G12280.1 20407024
AT3G48750.1 EES19072 AT3G17020.1 17426018
AT3G48750.1 EES19072 AT3G17020.1 20706207
AT3G48750.1 EER99015 AT3G19150.1 11449057
AT3G48750.1 EER99015 AT3G19150.1 17426018
AT3G48750.1 EER99015 AT3G19150.1 20407024
AT3G48750.1 EER99015 AT3G19150.1 20706207
AT3G48750.1 OQU82384 AT3G21870.1 15197472
AT3G48750.1 EER95293 AT3G29360.1 20706207
AT3G48750.1 KXG37519 AT3G29360.1 20706207
AT3G48750.1 KXG38049 AT3G29360.1 20706207
AT3G48750.1 EES04403 AT3G48750.1 20407024
AT3G48750.1 KXG40336 AT3G48750.1 20407024
AT3G48750.1 EES04403 AT3G48750.1 20407024
AT3G48750.1 KXG40336 AT3G48750.1 20407024
AT3G48750.1 EES03220 AT3G49240.1 17426018
AT3G48750.1 EES19865 AT3G49240.1 17426018
AT3G48750.1 EES03220 AT3G49240.1 20706207
AT3G48750.1 EES19865 AT3G49240.1 20706207
AT3G48750.1 EER96424 AT3G50070.1 20407024
AT3G48750.1 EES15619 AT3G54180.1 20407024
AT3G48750.1 EES15619 AT3G54180.1 20407024
AT3G48750.1 EES07835 AT3G55000.1 17426018
AT3G48750.1 EES15493 AT3G55000.1 17426018
AT3G48750.1 EES11236 AT3G60550.1 15197472
AT3G48750.1 EER99528 AT4G03270.1 20407024
AT3G48750.1 EES12270 AT4G04020.1 20706207
AT3G48750.1 KXG26586 AT4G24820.1 20706207
AT3G48750.1 OQU85258 AT4G24820.1 20706207
AT3G48750.1 EES04513 AT4G28470.1 17426018
AT3G48750.1 EER96424 AT4G34160.1 11096103
AT3G48750.1 EER96424 AT4G34160.1 16517759
AT3G48750.1 EER96424 AT4G34160.1 16766674
AT3G48750.1 EER96424 AT4G34160.1 20407024
AT3G48750.1 EER91226 AT4G37630.1 20407024
AT3G48750.1 EER92677 AT4G37630.1 20407024
AT3G48750.1 EES17294 AT4G37630.1 20407024
AT3G48750.1 EES02793 AT5G06150.1 20018602
AT3G48750.1 EES03772 AT5G06150.1 20018602
AT3G48750.1 EES18429 AT5G06150.1 20018602
AT3G48750.1 KXG24389 AT5G06150.1 20018602
AT3G48750.1 EES02793 AT5G06150.1 20407024
AT3G48750.1 EES03772 AT5G06150.1 20407024
AT3G48750.1 EES18429 AT5G06150.1 20407024
AT3G48750.1 KXG24389 AT5G06150.1 20407024
AT3G48750.1 EER94473 AT5G07450.1 15197472
AT3G48750.1 EES12591 AT5G07450.1 15197472
AT3G48750.1 OQU85741 AT5G07450.1 15197472
AT3G48750.1 EES07560 AT5G10440.1 17426018
AT3G48750.1 KXG19603 AT5G10440.1 17426018
AT3G48750.1 EES07560 AT5G10440.1 20407024
AT3G48750.1 KXG19603 AT5G10440.1 20407024
AT3G48750.1 EES07560 AT5G10440.1 20407024
AT3G48750.1 KXG19603 AT5G10440.1 20407024
AT3G48750.1 EER95303 AT5G43080.1 20018602
AT3G48750.1 EES16237 AT5G43080.1 20018602
AT3G48750.1 OQU91386 AT5G43080.1 20018602
AT3G48750.1 EER95303 AT5G43080.1 20407024
AT3G48750.1 EES16237 AT5G43080.1 20407024
AT3G48750.1 OQU91386 AT5G43080.1 20407024
AT3G48750.1 EER91182 AT5G58290.1 20706207
AT3G48750.1 KXG39890 AT5G58290.1 20706207
AT3G48750.1 EER94473 AT5G61650.1 15197472
AT3G48750.1 EES12591 AT5G61650.1 15197472
AT3G48750.1 OQU85741 AT5G61650.1 15197472
AT3G48750.1 OQU92050 AT5G63610.1 17426018
AT3G48750.1 OQU92050 AT5G63610.1 20407024
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053930_P001 Maize cytosol 94.2 94.52
TraesCS6A01G078200.1 Wheat cytosol 88.74 88.74
TraesCS6B01G105100.1 Wheat cytosol 88.4 88.4
VIT_15s0045g00310.t01 Wine grape cytosol 84.64 84.35
PGSC0003DMT400075349 Potato cytosol 83.96 83.67
KRH36887 Soybean cytosol, nucleus 83.96 83.67
KRH11866 Soybean cytosol, nucleus 83.62 83.33
Solyc12g095860.1.1 Tomato cytosol, nucleus 83.28 82.99
GSMUA_Achr11P... Banana cytosol 82.94 82.65
KRH42252 Soybean cytosol 82.25 81.97
KRH58370 Soybean cytosol 82.59 80.67
Bra018036.1-P Field mustard cytosol 80.89 80.61
AT3G48750.1 Thale cress cytosol 80.89 80.61
KXG40336 Sorghum cytosol 80.55 80.27
CDX68497 Canola cytosol 80.2 79.93
GSMUA_Achr8P00030_001 Banana cytosol 82.59 78.57
Solyc11g070140.1.1 Tomato cytosol 78.5 78.23
Bra029917.1-P Field mustard cytosol 80.55 75.64
CDX87018 Canola cytosol 61.09 75.53
CDX83047 Canola cytosol 80.2 75.32
Solyc08g066330.1.1 Tomato cytosol 78.16 74.59
PGSC0003DMT400047738 Potato cytosol 74.4 71.95
CDY66197 Canola cytosol 80.89 70.12
HORVU6Hr1G013680.2 Barley cytosol, plastid 88.4 70.0
Os02t0123100-01 Rice mitochondrion 89.76 69.95
PGSC0003DMT400077428 Potato cytosol 69.28 68.12
CDY05870 Canola cytosol, plastid 80.2 62.01
EES15619 Sorghum cytosol 58.36 55.52
EER90152 Sorghum cytosol, mitochondrion, peroxisome 53.24 48.0
CDY67496 Canola cytosol 48.12 44.62
OQU80908 Sorghum mitochondrion 53.58 37.2
EES18176 Sorghum cytosol 45.73 31.31
OQU92050 Sorghum cytosol 47.78 29.72
KXG37128 Sorghum cytosol 37.54 25.58
EES07406 Sorghum cytosol 36.86 23.68
EER87741 Sorghum cytosol 36.18 22.41
EES05381 Sorghum nucleus 46.42 20.15
EES12419 Sorghum nucleus 46.42 19.65
Protein Annotations
Gene3D:1.10.510.10MapMan:13.1.1.2.1MapMan:18.4.3.1.1Gene3D:3.30.200.20EntrezGene:8068271UniProt:C5XT32
EnsemblPlants:EES04403ProteinID:EES04403ProteinID:EES04403.1GO:GO:0000003GO:GO:0000166GO:GO:0000226
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004693GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0005829GO:GO:0005856GO:GO:0005886GO:GO:0006139GO:GO:0006259GO:GO:0006281
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007049GO:GO:0007275GO:GO:0007346
GO:GO:0008150GO:GO:0008152GO:GO:0008284GO:GO:0008356GO:GO:0009058GO:GO:0009409
GO:GO:0009555GO:GO:0009628GO:GO:0009790GO:GO:0009791GO:GO:0009793GO:GO:0009987
GO:GO:0010005GO:GO:0010235GO:GO:0010444GO:GO:0010468GO:GO:0016020GO:GO:0016043
GO:GO:0016301GO:GO:0016572GO:GO:0016740GO:GO:0019538GO:GO:0030154GO:GO:0040020
GO:GO:0042023GO:GO:0044772GO:GO:0051301GO:GO:0051445GO:GO:0072686GO:GO:0098725
GO:GO:1902806InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF323InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220EnsemblPlantsGene:SORBI_3004G021000SUPFAM:SSF56112unigene:Sbi.6025InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A85294
RefSeq:XP_002451427.1:::::
Description
hypothetical protein
Coordinates
chr4:+:1633915..1638974
Molecular Weight (calculated)
33881.0 Da
IEP (calculated)
7.748
GRAVY (calculated)
-0.331
Length
293 amino acids
Sequence
(BLAST)
001: MDQYEKTEKI GEGTYGVVYK GKDRHTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH RNIVRLQDVV HNDKCIYLIF EYLDLDLKKH MDSSADFKNH
101: RIVKSYLYQI LRGLAYCHSH RVLHRDLKPQ NLLLDRRNNI LKLADFGLAR AFGIPVRTFT HEVVTLWYRA PEILLGARHY STPVDVWSVG CIFAEMVNQK
201: PLFPGDSEID ELFKIFRILG TPTEGTWPGV ATLPDYKSTF PKWPSMDLAT VVPTLEPAGI DLLSKMVRLD PSKRITARAA LEHEYFRDLE HAY
Best Arabidopsis Sequence Match ( AT3G48750.1 )
(BLAST)
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.