Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 2
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024342_P001 | Maize | plasma membrane | 91.19 | 90.92 |
| Zm00001d049357_P001 | Maize | plasma membrane | 90.69 | 90.69 |
| Os08t0224700-01 | Rice | plasma membrane | 85.73 | 85.82 |
| KXG27072 | Sorghum | plasma membrane | 81.28 | 79.66 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 48.48 | 74.84 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 75.71 | 74.43 |
| CDY12178 | Canola | cytosol | 73.89 | 73.59 |
| AT2G32730.1 | Thale cress | cytosol | 74.6 | 73.41 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 74.8 | 73.1 |
| KRH41754 | Soybean | nucleus | 74.19 | 72.86 |
| CDY19162 | Canola | extracellular | 73.79 | 72.61 |
| CDX79472 | Canola | cytosol, plastid | 73.38 | 72.57 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 73.68 | 72.51 |
| KRH60454 | Soybean | endoplasmic reticulum | 73.79 | 72.47 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.56 | 72.43 |
| CDY23791 | Canola | cytosol, plastid | 73.89 | 72.42 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 73.58 | 72.41 |
| PGSC0003DMT400040763 | Potato | cytosol | 72.77 | 72.41 |
| AT1G04810.1 | Thale cress | cytosol | 73.28 | 72.33 |
| CDX84724 | Canola | cytosol, plastid | 73.48 | 72.24 |
| Bra005560.1-P | Field mustard | plastid | 73.58 | 72.12 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 72.47 | 72.1 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 73.08 | 71.91 |
| Solyc09g091750.2.1 | Tomato | plastid | 72.98 | 71.81 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 69.84 | 71.21 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 19.23 | 63.33 |
| EES04513 | Sorghum | cytosol | 14.88 | 16.44 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | EntrezGene:8072167 | InterPro:ARM-like | InterPro:ARM-type_fold |
| UniProt:C5YIY1 | ncoils:Coil | EnsemblPlants:EES13543 | ProteinID:EES13543 | ProteinID:EES13543.1 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0034515 | GO:GO:0042176 | GO:GO:0043161 | GO:GO:0050790 | InterPro:IPR011989 | PFAM:PF01851 |
| PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | EnsemblPlantsGene:SORBI_3007G079300 |
| SUPFAM:SSF48371 | unigene:Sbi.10220 | UniParc:UPI0001A87569 | RefSeq:XP_002444048.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:9286728..9291990
Molecular Weight (calculated)
106840.0 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.115
Length
988 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAVMVSS AGSLLAMLQE PAPELKLHAL SSLNSLVHAF WHEISTSVSS IESLYEDEEF VQRQLAALVA SKVFFYLGEL NDALSYALGA GPLFDVSDDS
101: DYAQTLLAKA LDEYAAIQSR PTGEEKTMDP RLEAIVEKML DKCILDGKYQ QAMGMSVECR RLDKLEGAIS RCDNLHGALS YCINLSHQYV SHREYRLEIL
201: QCLVKIYQTL PNPDYLSICQ CLMFLGEPES VASILDKLIS GSKDDALLAY QTAFDLAENE NQAFLLNVRN HLDALSSHTS AHVDTDSGSA VPSNQTNAAT
301: EPSGDGQMRD DINMPNGSAT TVDPNAATRA DRLTKIKGIL SGETSIQLTL QFLYSHNRSD LQILKTIKQA VEMRNSVCHS ATICSNAIMH AGTTVDTFLR
401: ENLEWLGRAT NWAKFSATAG LGVIHRGHLQ QGRALMAPYL PQNGAGGSGS PYSEGGALYA LGLIHANHGE GIKDFLRESL RNATSEVVQH GACLGLGLAA
501: LGTSDEEICE DIKNILYTDS AVAGEAAGIG MGLLMVGTAS EKATEMLAYA HDTQHEKIIR GLSLGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
601: ALAYRGTANN KAIHQLLHFA VSDVSDDVRR TAVLALGFVL YNEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGTGLS EAISLLEPLT SDVVDFVRQG
701: ALIAMAMVMI QTNESYDSRV GAFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVTI KLKSRSKHDR LTAVVGLAVF TQFWYWYPLT YFISLAFSPT
801: ALIGLNSDLK VPKFEFLSNA KPSLFDYPKP VTQQTATASV KVPAAILSTY AKSKSRAKKE AESKAKEKAE DSSNASTSMQ VDGAAAAEKK APEPEPTFQI
901: LTNPARVVPA QEKFIKFLED SRYKPVKAAP SGFVLLQDLK PTEAEELALT DAPSTAATTN APASSASEPA AMAVDDEPQP PPAFEYTE
101: DYAQTLLAKA LDEYAAIQSR PTGEEKTMDP RLEAIVEKML DKCILDGKYQ QAMGMSVECR RLDKLEGAIS RCDNLHGALS YCINLSHQYV SHREYRLEIL
201: QCLVKIYQTL PNPDYLSICQ CLMFLGEPES VASILDKLIS GSKDDALLAY QTAFDLAENE NQAFLLNVRN HLDALSSHTS AHVDTDSGSA VPSNQTNAAT
301: EPSGDGQMRD DINMPNGSAT TVDPNAATRA DRLTKIKGIL SGETSIQLTL QFLYSHNRSD LQILKTIKQA VEMRNSVCHS ATICSNAIMH AGTTVDTFLR
401: ENLEWLGRAT NWAKFSATAG LGVIHRGHLQ QGRALMAPYL PQNGAGGSGS PYSEGGALYA LGLIHANHGE GIKDFLRESL RNATSEVVQH GACLGLGLAA
501: LGTSDEEICE DIKNILYTDS AVAGEAAGIG MGLLMVGTAS EKATEMLAYA HDTQHEKIIR GLSLGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
601: ALAYRGTANN KAIHQLLHFA VSDVSDDVRR TAVLALGFVL YNEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGTGLS EAISLLEPLT SDVVDFVRQG
701: ALIAMAMVMI QTNESYDSRV GAFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVTI KLKSRSKHDR LTAVVGLAVF TQFWYWYPLT YFISLAFSPT
801: ALIGLNSDLK VPKFEFLSNA KPSLFDYPKP VTQQTATASV KVPAAILSTY AKSKSRAKKE AESKAKEKAE DSSNASTSMQ VDGAAAAEKK APEPEPTFQI
901: LTNPARVVPA QEKFIKFLED SRYKPVKAAP SGFVLLQDLK PTEAEELALT DAPSTAATTN APASSASEPA AMAVDDEPQP PPAFEYTE
0001: MATPMVSSAG GLLAMLNEPH PVLKLHALSN LNNLVDQFWP EISTSVPIIE SLYEDEEFDL HQRQLAALLV SKVFYYLGEL NDSLSYALGA GPLFDVSEDS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
0101: DYVHTLLAKA IDEYASLRSK AVESNEMVDI DPRLEAIVER MLGKCISDGK YQQAMGIAIE CRRLDKLEEA IIKSDNVQGT LSYCINVSHS FVNRREYRHE
0201: VLSLLVKVYQ KLPSPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LALQIAFDLV ENEHQAFLLS VRDRLPAPKT RAVEATQAVE TTIAPNENPS
0301: GDVQMADETP AQTIVHETDP VDATYAERLT KIKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTN VEVIQHGACL GLGLSALGTA
0501: DEEIYDDVKS VLYTDSAVAG EAAGISMGLL LVGTATEKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGVFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLAVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVP TANTAVKLPT AVLSTSVKAK ARAKKEAEQK AIAEKTSGPE KPVNESGSGK GKASTEKEGD SMQVDSPAAV
0901: EKKAPEPEPA FEILVNPARV VPAQEKYIKL LDDSRYVPVK LAPSGFVLLK DLREHEPEVL SLTDAPTSTA SPATGTAAAA QGTPASAMAV DDEPQPPQAF
1001: EYAS
Arabidopsis Description
RPN2A26S proteasome non-ATPase regulatory subunit 1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:O48844]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.