Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plasma membrane: 23508561 plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024342_P001 | Maize | plasma membrane | 94.64 | 94.35 |
| EES13543 | Sorghum | endoplasmic reticulum | 90.69 | 90.69 |
| Os08t0224700-01 | Rice | plasma membrane | 82.19 | 82.27 |
| Zm00001d026265_P002 | Maize | plasma membrane | 82.49 | 79.75 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 78.64 | 77.08 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 48.89 | 75.47 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 76.52 | 75.22 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.01 | 74.28 |
| AT2G32730.1 | Thale cress | cytosol | 74.9 | 73.71 |
| CDY12178 | Canola | cytosol | 73.99 | 73.69 |
| CDY19162 | Canola | extracellular | 74.7 | 73.51 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 74.6 | 73.41 |
| CDX79472 | Canola | cytosol, plastid | 74.19 | 73.37 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 74.39 | 73.21 |
| CDX84724 | Canola | cytosol, plastid | 74.29 | 73.03 |
| CDY23791 | Canola | cytosol, plastid | 74.49 | 73.02 |
| KRH41754 | Soybean | nucleus | 73.99 | 72.66 |
| KRH60454 | Soybean | endoplasmic reticulum | 73.79 | 72.47 |
| AT1G04810.1 | Thale cress | cytosol | 73.18 | 72.23 |
| Bra005560.1-P | Field mustard | plastid | 73.68 | 72.22 |
| PGSC0003DMT400040763 | Potato | cytosol | 72.57 | 72.21 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 73.28 | 72.11 |
| Solyc09g091750.2.1 | Tomato | plastid | 73.18 | 72.01 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 72.27 | 71.9 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 13.36 | 71.35 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 69.94 | 71.31 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 18.83 | 62.0 |
| Zm00001d015259_P001 | Maize | cytosol | 15.08 | 16.74 |
| Zm00001d053881_P001 | Maize | mitochondrion, plastid | 14.88 | 16.48 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | UniProt:A0A1D6PTZ0 | ProteinID:AQK50095.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 |
| PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | UniParc:UPI000844A6C9 |
| EnsemblPlantsGene:Zm00001d049357 | EnsemblPlants:Zm00001d049357_P001 | EnsemblPlants:Zm00001d049357_T001 | SEG:seg | : | : |
Description
26S proteasome non-ATPase regulatory subunit 1 homolog B
Coordinates
chr4:-:27754839..27761380
Molecular Weight (calculated)
106653.0 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.075
Length
988 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAVMVSS AGSLLAMLQE PAPELKLHAL ASLNSLVHAF WHEISTSVSS IESLYEDEEF VQRQLAALVA SKVFFYLGEL NDALSYALGA GPLFDVSDDS
101: DYAQTLLAKA LDEYAAIQSR VTGEEKTMDP RLEAIVERML DKCILDGKYQ QAMGMSVECR RLDKLEGAIS RCDNLHGALS YCINLSHQYV SHREYRLEIL
201: QCLVKIYQTL PNPDYLSICQ CLMFLGEPES VASILDKLIS GSKDDALLAY QTAFDLAENE NQAFLLNVRD HLDALSSHTS AHVYPASGPA VPSNQTNAAT
301: EPSEDVQMRE NITTPNGSAV TVDPNASTHA DRLTKIKGIL SGETSIQLTL QFLYSHNRSD LQILKTIKQA VEMRNSVCHS ATICSNAIMH AGTTVDTFLR
401: ENLEWLGRAT NWAKFSATAG LGVIHRGHLQ QGRALMAPYL PQNGAGGSGS PYSEGGALYA LGLIHANHGE GIKEFLRESL RNTTSEVVQH GACLGLGLAA
501: LGTSDEEICE DIKNILYTDS AVAGEAAGIG LGLLMVGTAS EKATEMLAYA HDTQHEKIIR GLSLGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
601: ALAYRGTANN KAIHQLLHFA VSDVSDDVRR TAVLALGFVL YNEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGSGLS EAISLLEPLT SDVVDFVRQG
701: ALIAMAMVMI QTNESYDPRV GAFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVGI RLKSRSKHDR LTAVVGLAVF TQFWYWYPLT YFISLAFSPT
801: ALIGLNSDLK VPTFEFLSNA KPSLFDYPKP ATQQTAAASV KVPAAILSTY AKSKARAKKD AESKAKEKAD DSSNASTSMQ VDGAAAEKKA AEPEPAFQVL
901: TNPARVVPAQ EKFVKFLEGS RYKPVKAAPS GFVLLQDLKP TEAEELALTD APSTAAATTN ALASSASEPA AMAVDDEPQP PPAFEYTS
101: DYAQTLLAKA LDEYAAIQSR VTGEEKTMDP RLEAIVERML DKCILDGKYQ QAMGMSVECR RLDKLEGAIS RCDNLHGALS YCINLSHQYV SHREYRLEIL
201: QCLVKIYQTL PNPDYLSICQ CLMFLGEPES VASILDKLIS GSKDDALLAY QTAFDLAENE NQAFLLNVRD HLDALSSHTS AHVYPASGPA VPSNQTNAAT
301: EPSEDVQMRE NITTPNGSAV TVDPNASTHA DRLTKIKGIL SGETSIQLTL QFLYSHNRSD LQILKTIKQA VEMRNSVCHS ATICSNAIMH AGTTVDTFLR
401: ENLEWLGRAT NWAKFSATAG LGVIHRGHLQ QGRALMAPYL PQNGAGGSGS PYSEGGALYA LGLIHANHGE GIKEFLRESL RNTTSEVVQH GACLGLGLAA
501: LGTSDEEICE DIKNILYTDS AVAGEAAGIG LGLLMVGTAS EKATEMLAYA HDTQHEKIIR GLSLGIALTV YGREEEADTL IEQMTRDQDP ILRYGGMYAL
601: ALAYRGTANN KAIHQLLHFA VSDVSDDVRR TAVLALGFVL YNEPEQTPRI VSLLSESYNP HVRYGAALAV GISCAGSGLS EAISLLEPLT SDVVDFVRQG
701: ALIAMAMVMI QTNESYDPRV GAFRRQLEKI ILDKHEDTMS KMGAILASGI LDAGGRNVGI RLKSRSKHDR LTAVVGLAVF TQFWYWYPLT YFISLAFSPT
801: ALIGLNSDLK VPTFEFLSNA KPSLFDYPKP ATQQTAAASV KVPAAILSTY AKSKARAKKD AESKAKEKAD DSSNASTSMQ VDGAAAEKKA AEPEPAFQVL
901: TNPARVVPAQ EKFVKFLEGS RYKPVKAAPS GFVLLQDLKP TEAEELALTD APSTAAATTN ALASSASEPA AMAVDDEPQP PPAFEYTS
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.