Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27072 | Sorghum | plasma membrane | 90.48 | 90.48 |
| Zm00001d026265_P002 | Maize | plasma membrane | 89.58 | 88.36 |
| Os04t0608500-01 | Rice | plasma membrane | 26.09 | 85.39 |
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 83.23 | 81.38 |
| TraesCS2A01G430100.2 | Wheat | golgi | 83.83 | 81.25 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 82.74 | 80.97 |
| TraesCS1A01G348400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 74.5 | 79.81 |
| HORVU1Hr1G081810.8 | Barley | cytosol, plasma membrane | 75.6 | 79.71 |
| Zm00001d024342_P001 | Maize | plasma membrane | 77.68 | 79.01 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 78.27 | 78.74 |
| Zm00001d049357_P001 | Maize | plasma membrane | 77.08 | 78.64 |
| TraesCS1D01G351400.1 | Wheat | cytosol, endoplasmic reticulum | 78.17 | 78.64 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 48.51 | 76.41 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.59 | 76.36 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 75.1 | 75.32 |
| CDY12178 | Canola | cytosol | 73.02 | 74.19 |
| AT2G32730.1 | Thale cress | cytosol | 73.81 | 74.1 |
| KRH60454 | Soybean | endoplasmic reticulum | 73.71 | 73.86 |
| KRH41754 | Soybean | nucleus | 73.51 | 73.66 |
| CDY19162 | Canola | extracellular | 73.31 | 73.61 |
| CDX79472 | Canola | cytosol, plastid | 72.92 | 73.57 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 73.21 | 73.51 |
| CDY23791 | Canola | cytosol, plastid | 73.31 | 73.31 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 73.02 | 73.31 |
| Bra005560.1-P | Field mustard | plastid | 73.21 | 73.21 |
| PGSC0003DMT400040763 | Potato | cytosol | 72.12 | 73.21 |
| CDX84724 | Canola | cytosol, plastid | 72.92 | 73.13 |
| AT1G04810.1 | Thale cress | cytosol | 72.62 | 73.13 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 72.42 | 72.71 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 71.63 | 72.71 |
| Solyc09g091750.2.1 | Tomato | plastid | 72.02 | 72.31 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 69.44 | 72.24 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 20.44 | 68.67 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 11.21 | 61.08 |
| Zm00001d053881_P001 | Maize | mitochondrion, plastid | 14.68 | 16.59 |
| Zm00001d015259_P001 | Maize | cytosol | 14.48 | 16.4 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:103645964 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | UniProt:A0A1D6E013 | InterPro:ARM-like |
| InterPro:ARM-type_fold | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 |
| ProteinID:ONM14091.1 | ProteinID:ONM14103.1 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 |
| PANTHER:PTHR10943:SF10 | InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | TMHMM:TMhelix | UniParc:UPI00084322B6 | EnsemblPlantsGene:Zm00001d002373 |
| EnsemblPlants:Zm00001d002373_P006 | EnsemblPlants:Zm00001d002373_T006 | SEG:seg | : | : | : |
Description
26S proteasome non-ATPase regulatory subunit 1 homolog B
Coordinates
chr2:+:11329158..11336821
Molecular Weight (calculated)
109353.0 Da
IEP (calculated)
4.994
GRAVY (calculated)
-0.129
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVATVSSA SGLLAMLQEP APELKLHALD SLNSVVHLFW PEISTSVPTI ESLYEDEEFE QRQLAALVVS KVFYYLGELN DSLSYALGAG SLFDVSDDSD
0101: YAHALLAKAL DEYASIKTRA SKAAKEEENI DPRLEAIVER MLEKCILDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVNHREYRFE
0201: VLRCIVKIYQ TLPNPDYQSI CQCLMFLGEP ETVASILDTL LSGNKDDALL AYQTAFDLVE NENQAFLLNV RNRLASPTPV PSNPDSEPAV QDDQTASTVG
0301: TGTEAAGDVQ MRDDTAPNGN AHTVDPNEVA HADRLQKIKG ILSGETSIQL TLQFLYSHNR SDLLILKTIK QAVEMRNSVC HSSTICANAI MHAGTTVDTF
0401: LRENLVYDFS TASALSLAVA PFHKAIVFQE WLSRATNWAK FSATAGLGVI HRGHLQQGRA LMAPYLPQSG AVGGGSPYSE GGALYALGLI HANHGEGIKQ
0501: FLRESLRNTS AEVIQHGACL GLGLAALGTS DEEIYEDIKN VLYTDSAVAG EAAGIGMGLL MVGTASEKAS EMLAYAHDTQ HEKIIRGLSL GIALTVYGRE
0601: EEADTLIEQM TRDQDPILRY GGMYALALAY RGTANNKAIH QLLHFAVSDT PRIVSLLSES YNPHVRYGAA LAVGISCAGS GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGAFRRQL EKIILDKHED TMSKMGAILA SGVLDAGGRN VTIKLLSRNK HDKLTAVIGL AVFSQFWYWY PLLYFISLAF
0801: SPTAFIGLNS DLKVPKFEFL SHAKPSLFEY PKPTTQQTTT STVKLPTAIL STYAKAKSRA KKDAESKANQ EKATEEASGS TSSKAAKAQE KDADVMQVDN
0901: ATEKKAPEPE ATYQLLTNPA RVIPAQEKFI KFLENSRYVP VKPAPSGFIL LRDLQPTEAE DLALTDAPTA VGGSTGNTAT AASQQGSGSS AMAVDDEPQP
1001: PQPFEYSS
0101: YAHALLAKAL DEYASIKTRA SKAAKEEENI DPRLEAIVER MLEKCILDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVNHREYRFE
0201: VLRCIVKIYQ TLPNPDYQSI CQCLMFLGEP ETVASILDTL LSGNKDDALL AYQTAFDLVE NENQAFLLNV RNRLASPTPV PSNPDSEPAV QDDQTASTVG
0301: TGTEAAGDVQ MRDDTAPNGN AHTVDPNEVA HADRLQKIKG ILSGETSIQL TLQFLYSHNR SDLLILKTIK QAVEMRNSVC HSSTICANAI MHAGTTVDTF
0401: LRENLVYDFS TASALSLAVA PFHKAIVFQE WLSRATNWAK FSATAGLGVI HRGHLQQGRA LMAPYLPQSG AVGGGSPYSE GGALYALGLI HANHGEGIKQ
0501: FLRESLRNTS AEVIQHGACL GLGLAALGTS DEEIYEDIKN VLYTDSAVAG EAAGIGMGLL MVGTASEKAS EMLAYAHDTQ HEKIIRGLSL GIALTVYGRE
0601: EEADTLIEQM TRDQDPILRY GGMYALALAY RGTANNKAIH QLLHFAVSDT PRIVSLLSES YNPHVRYGAA LAVGISCAGS GLSDAISLLE PLTSDVVDFV
0701: RQGALIAMAM VMIQTNESFD SRVGAFRRQL EKIILDKHED TMSKMGAILA SGVLDAGGRN VTIKLLSRNK HDKLTAVIGL AVFSQFWYWY PLLYFISLAF
0801: SPTAFIGLNS DLKVPKFEFL SHAKPSLFEY PKPTTQQTTT STVKLPTAIL STYAKAKSRA KKDAESKANQ EKATEEASGS TSSKAAKAQE KDADVMQVDN
0901: ATEKKAPEPE ATYQLLTNPA RVIPAQEKFI KFLENSRYVP VKPAPSGFIL LRDLQPTEAE DLALTDAPTA VGGSTGNTAT AASQQGSGSS AMAVDDEPQP
1001: PQPFEYSS
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.