Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G427700.2 | Wheat | endoplasmic reticulum, plasma membrane | 98.54 | 98.45 |
| TraesCS2A01G430100.2 | Wheat | golgi | 99.03 | 98.08 |
| KXG27072 | Sorghum | plasma membrane | 86.7 | 88.59 |
| Os04t0608500-01 | Rice | plasma membrane | 26.12 | 87.34 |
| Zm00001d026265_P002 | Maize | plasma membrane | 85.92 | 86.59 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 82.33 | 84.63 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 80.97 | 82.74 |
| GSMUA_Achr1P10550_001 | Banana | cytosol | 76.31 | 77.74 |
| VIT_10s0042g00800.t01 | Wine grape | cytosol, plastid | 73.2 | 75.02 |
| VIT_00s0215g00040.t01 | Wine grape | extracellular | 46.6 | 75.0 |
| AT2G32730.1 | Thale cress | cytosol | 72.72 | 74.6 |
| CDX79472 | Canola | cytosol, plastid | 72.33 | 74.57 |
| CDY12178 | Canola | cytosol | 71.55 | 74.29 |
| KRH60454 | Soybean | endoplasmic reticulum | 72.43 | 74.16 |
| Bra022899.1-P | Field mustard | cytosol, plastid | 72.23 | 74.1 |
| KRH41754 | Soybean | nucleus | 72.33 | 74.06 |
| CDX84724 | Canola | cytosol, plastid | 72.23 | 74.03 |
| CDY19162 | Canola | extracellular | 71.84 | 73.71 |
| Bra021810.1-P | Field mustard | cytosol, plastid | 71.75 | 73.61 |
| Bra005560.1-P | Field mustard | plastid | 71.94 | 73.51 |
| CDY23791 | Canola | cytosol, plastid | 71.75 | 73.31 |
| PGSC0003DMT400076219 | Potato | endoplasmic reticulum | 71.26 | 73.11 |
| PGSC0003DMT400040763 | Potato | cytosol | 70.39 | 73.01 |
| CDY60623 | Canola | endoplasmic reticulum, golgi | 68.54 | 72.86 |
| Solyc09g091750.2.1 | Tomato | plastid | 70.97 | 72.81 |
| Solyc05g053650.2.1 | Tomato | endoplasmic reticulum | 70.1 | 72.71 |
| AT1G04810.1 | Thale cress | cytosol | 70.49 | 72.53 |
| VIT_00s0125g00350.t01 | Wine grape | cytosol | 12.82 | 71.35 |
| VIT_00s0215g00050.t01 | Wine grape | cytosol | 18.64 | 64.0 |
| TraesCS7B01G321900.1 | Wheat | cytosol | 13.01 | 15.46 |
| TraesCS7B01G322000.1 | Wheat | cytosol | 13.01 | 15.23 |
| TraesCS6B01G144500.1 | Wheat | cytosol | 13.2 | 15.04 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.2 | InterPro:26S_Psome_Rpn2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 |
| InterPro:IPR011989 | PFAM:PF01851 | PFAM:PF13646 | PIRSF:PIRSF015947 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF10 |
| InterPro:Proteasome/cyclosome_rpt | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2B01G450800 | EnsemblPlants:TraesCS2B01G450800.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:+:644144675..644150345
Molecular Weight (calculated)
111042.0 Da
IEP (calculated)
4.839
GRAVY (calculated)
-0.154
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAVATVSSA GGILAMLHEP AEELKLHALA SLNSVVHLFY PEISTSIPTI ESLYEDEEFD QRQLAALVVS KVFYYLGELN DALLYALGAG PLFDVSEDSD
0101: YAHALLAKAL DEYASFKTRA SKATEEEGNV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVSHREYRCE
0201: TLPHPDFLSI CQCLMFLGEP ETVANILDTL ISGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLDSQTPG QSNPDSGSAL PVDQTVNVGT TSTEPAGDVQ
0301: MGNDTTTANG NAHPVDPNEA AHADKLAKLK GILSGEKSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICSNA IMHAGTTVDT FLRENLEWLS
0401: RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG LASLGTADEE
0501: VFEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKAAEML AYAHDTQHEK IIRGLALGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM YALALAYRGT
0601: ANNKAIHQLL HFAVSDVSDD VRRTAVMGLG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGT GLSDAISLLE PLTSDVVDFV RQGALIAMAM
0701: VMIQTNESFD SRVGTFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVIGL AVFTQFWYWY PLLYFISLAF SPTAIIGLNS
0801: NLEVPKFEFL SHAKPSLFEY PKPTTQQTTT SAVKLPTAIL STYAKAKSRA KKDAESKAAN QEKTAEAESK ANQEKSTAES KPSQEKSADT ESKAKTTEDA
0901: SGSTSGEAAK TQEKDGDAMQ VDGAAEKKAP EPEPAFQILA NPARVVPAQE KFIKFIEGSR YVPVRPAPCG FILLRDTQPS EAEELVLTDA PATVATGTGN
1001: NAAAAAAGQG SAAMAVDDEP QPPQPFEYSA
0101: YAHALLAKAL DEYASFKTRA SKATEEEGNV DPRLEAIVER MLEKCVLDGK YQQAMGMAVE CRRLDKLEEA IVRCDNIHGA LSYCINLSHQ YVSHREYRCE
0201: TLPHPDFLSI CQCLMFLGEP ETVANILDTL ISGSKDDALL AYQIAFDLVE NENQAFLLNV RNRLDSQTPG QSNPDSGSAL PVDQTVNVGT TSTEPAGDVQ
0301: MGNDTTTANG NAHPVDPNEA AHADKLAKLK GILSGEKSIQ LTLQFLYSHN RSDLLILKTI KQAVEMRNSV CHSATICSNA IMHAGTTVDT FLRENLEWLS
0401: RATNWAKFSA TAGLGVIHRG HLQQGRALMA PYLPQSGAVG GGSPYSEGGA LYALGLIHAN HGEGIKQFLR ESLRNTSAEV IQHGACLGLG LASLGTADEE
0501: VFEDIKNVLY TDSAVAGEAA GIGMGLLMVG TASEKAAEML AYAHDTQHEK IIRGLALGIA LTVYGREEEA DTLIEQMTRD QDPILRYGGM YALALAYRGT
0601: ANNKAIHQLL HFAVSDVSDD VRRTAVMGLG FVLYNEPEQT PRIVSLLSES YNPHVRYGAA LAVGISCAGT GLSDAISLLE PLTSDVVDFV RQGALIAMAM
0701: VMIQTNESFD SRVGTFRRQL EKIILDKHED TMSKMGAILA SGILDAGGRN VTIKLLSRNK HDKLTAVIGL AVFTQFWYWY PLLYFISLAF SPTAIIGLNS
0801: NLEVPKFEFL SHAKPSLFEY PKPTTQQTTT SAVKLPTAIL STYAKAKSRA KKDAESKAAN QEKTAEAESK ANQEKSTAES KPSQEKSADT ESKAKTTEDA
0901: SGSTSGEAAK TQEKDGDAMQ VDGAAEKKAP EPEPAFQILA NPARVVPAQE KFIKFIEGSR YVPVRPAPCG FILLRDTQPS EAEELVLTDA PATVATGTGN
1001: NAAAAAAGQG SAAMAVDDEP QPPQPFEYSA
0001: MAAAMVSSAG GLLAMLNEPH PSLKLHALSY LIRLVDQFWP EISTSVPIIE SLYEDEEFDQ HQRQLAALLA SKVFYYLGEL NDSLSYALGA GSLFDVSEDS
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
0101: DYIHTLLSKA IDEYAILRSK AVESSEVVEI DPRLVAIVER MLDKCITDGK YQQAMGIAIE CRRLDKLEEA IIKSENVQGT LSYCINVSHS FVNQREYRHE
0201: VLRLLVNVYQ KLASPDYLSI CQCLMFLDEP QGVASILEKL LRSENKDDAL LAFQISFDLV QNEHQAFLMS VRDRLPAPKT RPVEAIQAVE TSTAQNENTA
0301: GDVQMADETP SQTIVHETDP VDAVYAERLT KAKGILSGET SIQLTLQFLY SHNKSDLLIL KTIKQSVEMR NSVCHSATIY ANAIMHAGTT VDTFLRENLD
0401: WLSRATNWAK FSATAGLGVI HRGHLQQGRS LMAPYLPQGG AGGGGSPYSE GGALYALGLI HANHGEGIKQ FLRDSLRSTS VEVIQHGACL GLGLAALGTA
0501: DEDIYDDIKS VLYTDSAVAG EAAGISMGLL LVGTATDKAS EMLAYAHETQ HEKIIRGLAL GIALTVYGRE EGADTLIEQM TRDQDPIIRY GGMYALALAY
0601: SGTANNKAIR QLLHFAVSDV SDDVRRTAVL ALGFVLYSDP EQTPRIVSLL SESYNPHVRY GAALAVGISC AGTGLSEAIS LLEPLTSDVV DFVRQGALIA
0701: MAMVMVQISE ASDSRVGAFR RQLEKIILDK HEDTMSKMGA ILASGILDAG GRNVTIRLLS KTKHDKVTAV IGLTVFSQFW YWYPLIYFIS LAFSPTAFIG
0801: LNYDLKVPKF EFMSHAKPSL FEYPKPTTVA TANTAAKLPT AVLSTSAKAK AKAKKEAEQK AKAENSGNEA GKANAASDEK EAESMQVDST ATTVEKKVEP
0901: EATFEILVNP ARVVPSQEKY IKLMEDSRYV PMKLAPSGFV LLRDLRPHEP EVLSLTDAPT STASPAVGAE AAGQAQQAAT TSAMAIDDEP QPPQAFEYAS
1001: P
Arabidopsis Description
RPN2B26S proteasome non-ATPase regulatory subunit 1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.