Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G421600.1 | Wheat | mitochondrion | 86.27 | 91.55 |
| TraesCS7D01G413800.1 | Wheat | cytosol | 65.4 | 91.45 |
| TraesCS7B01G322000.1 | Wheat | cytosol | 81.2 | 80.0 |
| HORVU7Hr1G097500.16 | Barley | endoplasmic reticulum, golgi, plasma membrane | 46.71 | 69.11 |
| Os09t0326800-01 | Rice | plasma membrane | 68.51 | 66.67 |
| Os06t0699900-01 | Rice | plasma membrane | 68.51 | 65.93 |
| TraesCS6B01G144500.1 | Wheat | cytosol | 66.67 | 63.94 |
| GSMUA_Achr11P... | Banana | cytosol | 63.9 | 62.39 |
| Solyc07g053650.2.1 | Tomato | nucleus | 58.59 | 61.8 |
| KRH55899 | Soybean | endoplasmic reticulum, nucleus | 60.55 | 59.32 |
| KRH25643 | Soybean | endoplasmic reticulum, nucleus | 60.55 | 59.32 |
| PGSC0003DMT400024306 | Potato | cytosol | 60.9 | 58.93 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 60.44 | 58.88 |
| CDY38389 | Canola | cytosol, extracellular | 59.63 | 57.96 |
| AT4G28470.1 | Thale cress | cytosol | 59.52 | 57.91 |
| Bra011030.1-P | Field mustard | cytosol | 59.4 | 57.8 |
| CDY35187 | Canola | cytosol, extracellular | 59.4 | 57.74 |
| AT2G20580.1 | Thale cress | cytosol | 59.05 | 57.46 |
| CDY05774 | Canola | cytosol | 59.28 | 57.37 |
| Bra024200.1-P | Field mustard | cytosol | 58.71 | 57.13 |
| CDY29907 | Canola | extracellular | 58.71 | 57.13 |
| CDX92875 | Canola | extracellular | 58.59 | 57.01 |
| Bra036488.1-P | Field mustard | cytosol, extracellular, plasma membrane | 54.56 | 56.78 |
| CDX97442 | Canola | cytosol | 57.79 | 56.74 |
| Bra010366.1-P | Field mustard | cytosol | 57.79 | 56.55 |
| Solyc10g008180.1.1 | Tomato | plastid | 47.52 | 56.36 |
| CDY14239 | Canola | cytosol, extracellular | 57.55 | 56.19 |
| CDY31952 | Canola | plasma membrane | 55.36 | 56.07 |
| KRH57774 | Soybean | endoplasmic reticulum, plasma membrane | 17.88 | 53.08 |
| AT4G08140.1 | Thale cress | cytosol | 4.84 | 50.0 |
| KRH57675 | Soybean | cytosol | 16.49 | 47.19 |
| PGSC0003DMT400056260 | Potato | cytosol | 9.69 | 46.67 |
| Solyc10g008170.2.1 | Tomato | cytosol | 10.5 | 45.05 |
| CDY72396 | Canola | cytosol | 6.57 | 39.58 |
| KRH30269 | Soybean | cytosol | 8.19 | 34.63 |
| CDX99107 | Canola | cytosol | 8.54 | 28.57 |
| CDY33144 | Canola | extracellular | 9.8 | 27.16 |
| CDY65736 | Canola | extracellular | 10.96 | 23.4 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 3.69 | 22.07 |
| Bra003811.1-P | Field mustard | endoplasmic reticulum | 4.38 | 15.45 |
| TraesCS1B01G363000.1 | Wheat | cytosol | 15.46 | 13.37 |
| TraesCS2B01G450800.2 | Wheat | cytosol, endoplasmic reticulum | 15.46 | 13.01 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.6.2.2.1 | InterPro:26S_Psome_Rpn1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0042176 | InterPro:IPR011989 |
| PIRSF:PIRSF015965 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF8 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS7B01G321900 | EnsemblPlants:TraesCS7B01G321900.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:572631458..572638970
Molecular Weight (calculated)
95024.4 Da
IEP (calculated)
6.004
GRAVY (calculated)
0.030
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDDLSEED LELKARLEDC VERAQSRDPR LRIGAIDTLR KEIRAATSSM TSAPKQLKFL RAHYGTLKTC FERMQDSEQQ KKHMADILSV LALTMSGEGE
101: RESLKYCMMG SLVDVCSWGH EYVRNLAFEI GKEWKFNGSS TPIESKINVV LEIVKFHMKH NAETEALDLL LEVGYLEMLS DEKKEEYLTM LLHLVDSTNY
201: KRACLYLTSC SKYLSTPDHE ATLGTAYDMY MKFRDLASAL RIALLVDDHK YCGQNVKIKM VFEETKDFSL KQQFAFMIAR YGLSVEIDDE MVADENEKNA
301: LQEVVCNTKL GEGYHILARD IGVMEPKSPE DIYKVHLIGG RGAKSSSLDS ARPNLAAIFV NAFVNAGYCQ DKLMTALPDS LLFKNNELWK ASAVASLGMI
401: HLWDPDLGFA ELDKYLHSND TNVVAGTLLG IGIASYGVKK EYDHAHALIS EYSTGATSIT RIGGILGLGI AYAGSRKDEL KSHFSITLSN SQTPFEELVF
501: SSISLGLVFV GSCNEEIAES IISVLKNHSK ELTEPIIHLL PVALGLLYLG KQEMVDATAA KVSETLEEPL KKYCGLTLTS LAYAGTGNVL KVQELLRSCS
601: NKLVKGGSDQ GPAVLGIALI AMAEGLGAEM AVRSLEHLLQ YGDCSIRRAV PLALGMLCVS NPKAVVVDTL SRLSHDADGA VSMAAIISLG LIGAGTNNAR
701: IAGLLRKLSS QQYGGYLYCV RIAQGLLHLG KGLLTLDPCH SDRLLLSPVA LAGLVTVLHA CLAMQPIIVE KYPYMLYILA LAMQPRMLLT VDEDLKPLHV
801: PVRVGQAVDV VGQAGSPRTI TGFQTYNTPV VLAAGEQAEL ATEKYIPLTP VLEGFVILRK NPEHHED
101: RESLKYCMMG SLVDVCSWGH EYVRNLAFEI GKEWKFNGSS TPIESKINVV LEIVKFHMKH NAETEALDLL LEVGYLEMLS DEKKEEYLTM LLHLVDSTNY
201: KRACLYLTSC SKYLSTPDHE ATLGTAYDMY MKFRDLASAL RIALLVDDHK YCGQNVKIKM VFEETKDFSL KQQFAFMIAR YGLSVEIDDE MVADENEKNA
301: LQEVVCNTKL GEGYHILARD IGVMEPKSPE DIYKVHLIGG RGAKSSSLDS ARPNLAAIFV NAFVNAGYCQ DKLMTALPDS LLFKNNELWK ASAVASLGMI
401: HLWDPDLGFA ELDKYLHSND TNVVAGTLLG IGIASYGVKK EYDHAHALIS EYSTGATSIT RIGGILGLGI AYAGSRKDEL KSHFSITLSN SQTPFEELVF
501: SSISLGLVFV GSCNEEIAES IISVLKNHSK ELTEPIIHLL PVALGLLYLG KQEMVDATAA KVSETLEEPL KKYCGLTLTS LAYAGTGNVL KVQELLRSCS
601: NKLVKGGSDQ GPAVLGIALI AMAEGLGAEM AVRSLEHLLQ YGDCSIRRAV PLALGMLCVS NPKAVVVDTL SRLSHDADGA VSMAAIISLG LIGAGTNNAR
701: IAGLLRKLSS QQYGGYLYCV RIAQGLLHLG KGLLTLDPCH SDRLLLSPVA LAGLVTVLHA CLAMQPIIVE KYPYMLYILA LAMQPRMLLT VDEDLKPLHV
801: PVRVGQAVDV VGQAGSPRTI TGFQTYNTPV VLAAGEQAEL ATEKYIPLTP VLEGFVILRK NPEHHED
001: MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
Arabidopsis Description
RPN1ARPN1A [Source:UniProtKB/TrEMBL;Acc:A0A178VZC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.