Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G329600.1 | Wheat | cytosol | 99.32 | 99.1 |
| TraesCS5B01G544500.1 | Wheat | cytosol | 98.64 | 98.42 |
| HORVU5Hr1G122560.2 | Barley | cytosol, nucleus | 97.74 | 93.51 |
| Os03t0851300-01 | Rice | cytosol | 90.95 | 90.74 |
| HORVU5Hr1G122430.1 | Barley | plastid | 98.87 | 90.29 |
| EER90506 | Sorghum | cytosol | 88.46 | 88.26 |
| EES07793 | Sorghum | cytosol | 87.78 | 87.58 |
| Zm00001d012844_P002 | Maize | plasma membrane | 87.56 | 87.36 |
| Zm00001d018523_P003 | Maize | extracellular | 85.29 | 85.1 |
| GSMUA_Achr2P16950_001 | Banana | cytosol | 81.0 | 84.83 |
| GSMUA_Achr4P23680_001 | Banana | cytosol | 79.41 | 83.18 |
| KRH59502 | Soybean | cytosol | 82.81 | 82.99 |
| Zm00001d009068_P002 | Maize | extracellular | 38.01 | 82.76 |
| HORVU1Hr1G003160.1 | Barley | cytosol, nucleus, plastid | 36.65 | 82.65 |
| CDY56539 | Canola | cytosol, nucleus | 69.68 | 80.63 |
| CDX81147 | Canola | cytosol | 76.47 | 80.09 |
| VIT_07s0031g01970.t01 | Wine grape | cytosol | 81.0 | 80.09 |
| CDX69878 | Canola | cytosol | 76.02 | 79.62 |
| KRH64121 | Soybean | cytosol | 79.64 | 79.46 |
| CDY21613 | Canola | cytosol | 75.79 | 79.38 |
| Bra009074.1-P | Field mustard | cytosol | 75.79 | 79.38 |
| CDY40066 | Canola | cytosol | 75.79 | 79.38 |
| Solyc04g051370.2.1 | Tomato | nucleus | 79.19 | 79.19 |
| PGSC0003DMT400060796 | Potato | cytosol | 79.19 | 79.19 |
| Solyc04g012040.2.1 | Tomato | cytosol | 78.96 | 78.96 |
| Bra006038.1-P | Field mustard | cytosol | 75.34 | 78.91 |
| KRH53822 | Soybean | cytosol | 78.73 | 78.2 |
| Bra028611.1-P | Field mustard | cytosol | 77.83 | 76.79 |
| CDX85790 | Canola | cytosol | 77.83 | 76.79 |
| AT5G64760.1 | Thale cress | cytosol | 76.24 | 76.24 |
| KRH43368 | Soybean | vacuole | 82.35 | 75.83 |
| Bra026640.1-P | Field mustard | cytosol | 52.49 | 74.36 |
| PGSC0003DMT400050736 | Potato | cytosol | 78.73 | 73.89 |
| KRH43942 | Soybean | cytosol, mitochondrion, nucleus | 23.98 | 69.74 |
| AT5G09900.3 | Thale cress | nucleus | 62.44 | 59.74 |
| VIT_12s0035g00780.t01 | Wine grape | cytosol | 12.22 | 58.7 |
| CDY14507 | Canola | cytosol | 9.05 | 55.56 |
| VIT_08s0058g00020.t01 | Wine grape | cytosol | 9.95 | 53.66 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G543600.1 | EnsemblPlantsGene:TraesCS5D01G543600 | Gene3D:1.10.10.10 | InterPro:IPR000717 | InterPro:IPR036388 | InterPro:PCI_dom |
| InterPro:PSMD12 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | PANTHER:PTHR10855 | PANTHER:PTHR10855:SF1 | PFAM:PF01399 |
| PFscan:PS50250 | SMART:SM00088 | SMART:SM00753 | SUPFAM:SSF46785 | MapMan:19.2.6.2.2.4 | : |
Description
No Description!
Coordinates
chr5D:-:553677988..553682129
Molecular Weight (calculated)
50373.5 Da
IEP (calculated)
7.984
GRAVY (calculated)
-0.215
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSGLDAA IESLLNTEKQ CRLAGDVAGT RKAAVDIVEL CFKDAAWKTL NDQIVVLSKR RGQLKQAITA VVQKAMEYID VTPDVETRIE LIKTLSSVAA
101: GKIYVEIERA RLIKRLAKIK EEQGKIDEAA EIMQEVAVET FGSMAKTEKL AFILEQVRLC LDRQDYVRAQ ILSRKISPRV FDADTSKDKK KPKEGDNMVQ
201: EAPADVPSLL ELKRIYYELM IRYYSHNNDY LEICRCYKSI YEIPSIKEDP AKWTPILRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP NFRLLLKQVV
301: TMEVIQWTKL WEFFKDEYEN EKNLLGGALG TKAAEDLKLR IIEHNILVVS KYYSRITLKR LADLLCLSLQ EAEKHISDMV NSKALIAKID RPMGIVSFRT
401: AQDSNGVLNS WASNLEKLLD LVEKSCHQIH KETMIHKAVL KA
101: GKIYVEIERA RLIKRLAKIK EEQGKIDEAA EIMQEVAVET FGSMAKTEKL AFILEQVRLC LDRQDYVRAQ ILSRKISPRV FDADTSKDKK KPKEGDNMVQ
201: EAPADVPSLL ELKRIYYELM IRYYSHNNDY LEICRCYKSI YEIPSIKEDP AKWTPILRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP NFRLLLKQVV
301: TMEVIQWTKL WEFFKDEYEN EKNLLGGALG TKAAEDLKLR IIEHNILVVS KYYSRITLKR LADLLCLSLQ EAEKHISDMV NSKALIAKID RPMGIVSFRT
401: AQDSNGVLNS WASNLEKLLD LVEKSCHQIH KETMIHKAVL KA
001: MANSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
Arabidopsis Description
EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.