Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018523_P003 | Maize | extracellular | 95.26 | 95.26 |
| EER90506 | Sorghum | cytosol | 95.26 | 95.26 |
| Os03t0851300-01 | Rice | cytosol | 92.55 | 92.55 |
| TraesCS4A01G329600.1 | Wheat | cytosol | 88.26 | 88.26 |
| TraesCS5B01G544500.1 | Wheat | cytosol | 87.81 | 87.81 |
| TraesCS5D01G543600.1 | Wheat | golgi, unclear | 87.58 | 87.78 |
| GSMUA_Achr2P16950_001 | Banana | cytosol | 81.04 | 85.07 |
| GSMUA_Achr4P23680_001 | Banana | cytosol | 79.46 | 83.41 |
| KRH59502 | Soybean | cytosol | 82.84 | 83.22 |
| HORVU5Hr1G122560.2 | Barley | cytosol, nucleus | 86.68 | 83.12 |
| CDY56539 | Canola | cytosol, nucleus | 69.53 | 80.63 |
| KRH64121 | Soybean | cytosol | 80.14 | 80.14 |
| HORVU5Hr1G122430.1 | Barley | plastid | 87.36 | 79.96 |
| CDX81147 | Canola | cytosol | 75.85 | 79.62 |
| CDY40066 | Canola | cytosol | 75.62 | 79.38 |
| KRH53822 | Soybean | cytosol | 79.46 | 79.1 |
| Solyc04g051370.2.1 | Tomato | nucleus | 78.78 | 78.96 |
| Bra006038.1-P | Field mustard | cytosol | 75.17 | 78.91 |
| CDX69878 | Canola | cytosol | 74.72 | 78.44 |
| CDY21613 | Canola | cytosol | 74.49 | 78.2 |
| Bra009074.1-P | Field mustard | cytosol | 74.49 | 78.2 |
| Solyc04g012040.2.1 | Tomato | cytosol | 77.65 | 77.83 |
| PGSC0003DMT400060796 | Potato | cytosol | 77.43 | 77.6 |
| CDX85790 | Canola | cytosol | 78.33 | 77.46 |
| Bra028611.1-P | Field mustard | cytosol | 78.33 | 77.46 |
| KRH43368 | Soybean | vacuole | 82.39 | 76.04 |
| Bra026640.1-P | Field mustard | cytosol | 53.27 | 75.64 |
| AT5G64760.1 | Thale cress | cytosol | 74.94 | 75.11 |
| PGSC0003DMT400050736 | Potato | cytosol | 78.33 | 73.67 |
| HORVU1Hr1G003160.1 | Barley | cytosol, nucleus, plastid | 31.83 | 71.94 |
| KRH43942 | Soybean | cytosol, mitochondrion, nucleus | 24.15 | 70.39 |
| AT5G09900.3 | Thale cress | nucleus | 62.75 | 60.17 |
| CDY14507 | Canola | cytosol | 9.03 | 55.56 |
| OQU77597 | Sorghum | plastid | 10.38 | 45.54 |
| OQU81472 | Sorghum | extracellular | 6.55 | 40.28 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:19.2.6.2.2.4 | EntrezGene:8055345 | UniProt:C5XWM5 | ncoils:Coil | EnsemblPlants:EES07793 |
| ProteinID:EES07793 | ProteinID:EES07793.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008541 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031595 | GO:GO:0043161 | InterPro:IPR000717 | InterPro:IPR036388 | InterPro:PCI_dom |
| PFAM:PF01399 | PFscan:PS50250 | InterPro:PSMD12 | PANTHER:PTHR10855 | PANTHER:PTHR10855:SF1 | SMART:SM00088 |
| SMART:SM00753 | EnsemblPlantsGene:SORBI_3004G353200 | SUPFAM:SSF46785 | unigene:Sbi.20284 | UniParc:UPI0001A86157 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | RefSeq:XP_002454817.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:68135946..68140167
Molecular Weight (calculated)
50687.8 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.219
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDSTNLDA AIESLLNVEK QMRLAGDVAG TRKAVIDIVE LCYKAGAWKT LNDQIVLLSK RRGQLKQAIT AMVQKAMDYI DLTPDIDTRI ELIKTLSSVS
101: AGKIYVEIER ARLIKRLAKI KEEQGQIDEA ADLMQEVAVE TFGSMAKTEK IAFILEQVRL CLDRQDYVRA QILSRKISTR VFDADPSKEK KKPKEGDNIV
201: QDAPADIPSL LELKRIYYEL MIRYYSHNND YLEICRCYKA IYDIPAIKED PTKWIPILRK ICWYLVLAPH DPMQSSLLNA TLEDKNLSEI PNFRLLLKQL
301: VTMEVIQWTN LWEFFKEEYE KEENLLGGAL GAKASEDLKL RIIEHNILVV SKYYARVTLK RLADLLCLTL QEAEKHLSDM VNSKALIAKI DRPMGVVSFQ
401: TSQDSNGTLN SWATNLERLL DLVEKSCHEI HKETMIHKAV LKV
101: AGKIYVEIER ARLIKRLAKI KEEQGQIDEA ADLMQEVAVE TFGSMAKTEK IAFILEQVRL CLDRQDYVRA QILSRKISTR VFDADPSKEK KKPKEGDNIV
201: QDAPADIPSL LELKRIYYEL MIRYYSHNND YLEICRCYKA IYDIPAIKED PTKWIPILRK ICWYLVLAPH DPMQSSLLNA TLEDKNLSEI PNFRLLLKQL
301: VTMEVIQWTN LWEFFKEEYE KEENLLGGAL GAKASEDLKL RIIEHNILVV SKYYARVTLK RLADLLCLTL QEAEKHLSDM VNSKALIAKI DRPMGVVSFQ
401: TSQDSNGTLN SWATNLERLL DLVEKSCHEI HKETMIHKAV LKV
001: MGDSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
Arabidopsis Description
EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.