CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009068_P002	Maize	extracellular	51.39	18.23
KRH43942	Soybean	cytosol, mitochondrion, nucleus	37.5	17.76
CDY56539	Canola	cytosol, nucleus	65.28	12.3
CDY21613	Canola	cytosol	65.28	11.14
CDY40066	Canola	cytosol	65.28	11.14
CDX81147	Canola	cytosol	63.89	10.9
CDX69878	Canola	cytosol	62.5	10.66
CDX85790	Canola	cytosol	65.28	10.49
AT5G64760.1	Thale cress	cytosol	62.5	10.18
GSMUA_Achr4P23680_001	Banana	cytosol	58.33	9.95
GSMUA_Achr2P16950_001	Banana	cytosol	56.94	9.72
Solyc04g012040.2.1	Tomato	cytosol	58.33	9.5
Os03t0851300-01	Rice	cytosol	58.33	9.48
Solyc04g051370.2.1	Tomato	nucleus	56.94	9.28
VIT_07s0031g01970.t01	Wine grape	cytosol	56.94	9.17
KRH59502	Soybean	cytosol	55.56	9.07
TraesCS5D01G543600.1	Wheat	golgi, unclear	55.56	9.05
PGSC0003DMT400060796	Potato	cytosol	55.56	9.05
Zm00001d012844_P002	Maize	plasma membrane	55.56	9.03
Zm00001d018523_P003	Maize	extracellular	55.56	9.03
TraesCS5B01G544500.1	Wheat	cytosol	55.56	9.03
TraesCS4A01G329600.1	Wheat	cytosol	55.56	9.03
KRH64121	Soybean	cytosol	55.56	9.03
EES07793	Sorghum	cytosol	55.56	9.03
EER90506	Sorghum	cytosol	55.56	9.03
KRH53822	Soybean	cytosol	54.17	8.76
PGSC0003DMT400050736	Potato	cytosol	56.94	8.7
OQU77597	Sorghum	plastid	11.11	7.92
KRH43368	Soybean	vacuole	52.78	7.92
VIT_12s0035g00780.t01	Wine grape	cytosol	4.17	3.26
OQU81472	Sorghum	extracellular	0.0	0.0
VIT_08s0058g00020.t01	Wine grape	cytosol	0.0	0.0
HORVU5Hr1G035770.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY14507	EnsemblPlantsGene:GSBRNA2T00079213001	ProteinID:CDY14507	ProteinID:CDY14507.1	UniParc:UPI0004EE0146	UniProt:A0A078FNQ8
MapMan:35.1	:	:	:	:	:

Description

BnaC03g49520DBnaC03g49520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNQ8]

Coordinates

chrLK032044:-:59890..60204

Molecular Weight (calculated)

8314.4 Da

IEP (calculated)

9.873

GRAVY (calculated)

-0.082

Length

72 amino acids

Sequence
(BLAST)

1: MRYVIATTSY PSVKETPEQI PVLRKICWFL VLAPHDQMQS SLLNATLEDK CRSGYKGLLK RTQKMLPSYI II

Best Arabidopsis Sequence Match ( AT5G09900.2 )
(BLAST)

001: MANSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP

Arabidopsis Description

EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.