Factsheet for Zm00001d009068_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43942	Soybean	cytosol, mitochondrion, nucleus	46.8	62.5
CDY14507	Canola	cytosol	18.23	51.39
Zm00001d012844_P002	Maize	plasma membrane	93.6	42.89
Zm00001d018523_P003	Maize	extracellular	89.16	40.86
EER90506	Sorghum	cytosol	88.67	40.63
CDY56539	Canola	cytosol, nucleus	76.35	40.58
Os03t0851300-01	Rice	cytosol	85.71	39.28
GSMUA_Achr2P16950_001	Banana	cytosol	79.31	38.15
TraesCS5D01G543600.1	Wheat	golgi, unclear	82.76	38.01
TraesCS4A01G329600.1	Wheat	cytosol	82.76	37.92
TraesCS5B01G544500.1	Wheat	cytosol	82.27	37.7
CDX81147	Canola	cytosol	76.85	36.97
CDY40066	Canola	cytosol	76.85	36.97
KRH59502	Soybean	cytosol	80.3	36.96
GSMUA_Achr4P23680_001	Banana	cytosol	76.35	36.73
HORVU5Hr1G122560.2	Barley	cytosol, nucleus	82.76	36.36
KRH64121	Soybean	cytosol	79.31	36.34
Bra006038.1-P	Field mustard	cytosol	75.37	36.26
CDY21613	Canola	cytosol	75.37	36.26
CDX69878	Canola	cytosol	74.88	36.02
Bra009074.1-P	Field mustard	cytosol	74.88	36.02
Bra026640.1-P	Field mustard	cytosol	55.17	35.9
VIT_07s0031g01970.t01	Wine grape	cytosol	78.82	35.79
KRH53822	Soybean	cytosol	78.33	35.73
CDX85790	Canola	cytosol	76.85	34.82
Bra028611.1-P	Field mustard	cytosol	76.85	34.82
HORVU5Hr1G122430.1	Barley	plastid	82.76	34.71
Solyc04g012040.2.1	Tomato	cytosol	73.4	33.71
Solyc04g051370.2.1	Tomato	nucleus	73.4	33.71
KRH43368	Soybean	vacuole	79.31	33.54
PGSC0003DMT400060796	Potato	cytosol	72.91	33.48
AT5G64760.1	Thale cress	cytosol	72.41	33.26
PGSC0003DMT400050736	Potato	cytosol	72.91	31.42
HORVU1Hr1G003160.1	Barley	cytosol, nucleus, plastid	29.06	30.1
AT5G09900.3	Thale cress	nucleus	60.59	26.62
VIT_08s0058g00020.t01	Wine grape	cytosol	0.0	0.0
VIT_12s0035g00780.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d009068_P002	EnsemblPlants:Zm00001d009068_T002	EnsemblPlantsGene:Zm00001d009068	GO:GO:0000502	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	PANTHER:PTHR10855	ProteinID:AQK91294.1	SEG:seg	UniParc:UPI000844F96A	UniProt:A0A1D6FHL3
MapMan:19.2.6.2.2.4	:	:	:	:	:

Description

26S proteasome non-ATPase regulatory subunit 12 homolog B

Coordinates

chr8:-:34239322..34240913

Molecular Weight (calculated)

23674.9 Da

IEP (calculated)

8.576

GRAVY (calculated)

-0.325

Length

203 amino acids

Sequence
(BLAST)

001: MQNLLLLLSQ VRLFLDRQDY VRAQILSRKI STRVFDADPS KEKKKPKEGD NIVQDAPADI PSLLELKRIY YELMIRYYLH NNDYLEICRC YKALYDIPAT
101: KEDPTKWIPI LRKICWYLVL APHDPMQSSL LNATLEDKNL SEIPNFRLLL KQLVTMEEAE KHLSDMVNSK SLTAKIDRPM GVVSFRVVQD CNSTLNSWAT
201: NLK

Best Arabidopsis Sequence Match ( AT5G09900.1 )
(BLAST)

001: MGDSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP

Arabidopsis Description

EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.