Factsheet for HORVU5Hr1G122430.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G543600.1	Wheat	golgi, unclear	90.29	98.87
TraesCS4A01G329600.1	Wheat	cytosol	89.67	97.97
TraesCS5B01G544500.1	Wheat	cytosol	89.46	97.74
HORVU5Hr1G122560.2	Barley	cytosol, nucleus	90.29	94.59
Os03t0851300-01	Rice	cytosol	82.85	90.52
EER90506	Sorghum	cytosol	80.58	88.04
EES07793	Sorghum	cytosol	79.96	87.36
Zm00001d012844_P002	Maize	plasma membrane	79.75	87.13
Zm00001d018523_P003	Maize	extracellular	77.69	84.88
GSMUA_Achr2P16950_001	Banana	cytosol	73.55	84.36
HORVU1Hr1G003160.1	Barley	cytosol, nucleus, plastid	33.68	83.16
Zm00001d009068_P002	Maize	extracellular	34.71	82.76
GSMUA_Achr4P23680_001	Banana	cytosol	72.11	82.7
KRH59502	Soybean	cytosol	75.21	82.54
VIT_07s0031g01970.t01	Wine grape	cytosol	73.55	79.64
KRH64121	Soybean	cytosol	72.31	79.01
KRH53822	Soybean	cytosol	71.49	77.75
KRH43368	Soybean	vacuole	76.03	76.67
KRH43942	Soybean	cytosol, mitochondrion, nucleus	21.9	69.74
VIT_12s0035g00780.t01	Wine grape	cytosol	10.95	57.61
HORVU5Hr1G035770.1	Barley	cytosol	6.61	57.14
VIT_08s0058g00020.t01	Wine grape	cytosol	9.09	53.66

Protein Annotations

Gene3D:1.10.10.10	MapMan:19.2.6.2.2.4	UniProt:A0A287SZZ9	EnsemblPlantsGene:HORVU5Hr1G122430	EnsemblPlants:HORVU5Hr1G122430.1	InterPro:IPR000717
InterPro:IPR036388	InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250	InterPro:PSMD12	PANTHER:PTHR10855
PANTHER:PTHR10855:SF1	SMART:SM00088	SMART:SM00753	SUPFAM:SSF46785	UniParc:UPI000B4855BC	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:662131571..662136061

Molecular Weight (calculated)

54606.5 Da

IEP (calculated)

8.353

GRAVY (calculated)

-0.261

Length

484 amino acids

Sequence
(BLAST)

001: ILLSPRSIPP PSETSPPSKP KSAVVPSSPP PPSPPPSREI PTMEGSSGLD AAIESLLNTE KQCRLAGDVA GTRKAAVDIV ELCFKDGAWK TLNDQIVVLS
101: KRRGQLKQAI TAVVQKAMEY IDVAPDVETR IELIKTLSSV AAGKIYVEIE RARLIKRLAK IKEEQGKIDE AAEIMQEVAV ETFGSMAKTE KLAFILEQVR
201: LCLDRQDYVR AQILSRKISP RVFDADTSKD KKKPKDGDNM VQEAPADVPS LLELKRIYYE LMIRYYSHNN DYLEICRCYK SIYEIPSIKE DPAKWTPILR
301: KICWYLVLAP HDPMQSSLLN ATLEDKNLSE IPNFRLLLKQ VVTMEVIQWT KLWEFFKDEY ENEKNLLGGA LGTKAAEDLK LRIIEHNILV VSKYYSRISL
401: KRLADLLCLS LQEAEKHISD MVNSKALIAK IDRPMGIVSF RTAQDSNGVL NSWASNLEKL LDLVEKSCHQ IHKETMIHKA VLKA

Best Arabidopsis Sequence Match ( AT5G09900.2 )
(BLAST)

001: MANSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP

Arabidopsis Description

EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.