Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07793 | Sorghum | cytosol | 95.26 | 95.26 |
| Zm00001d012844_P002 | Maize | plasma membrane | 92.33 | 92.33 |
| Os03t0851300-01 | Rice | cytosol | 90.74 | 90.74 |
| Zm00001d009068_P002 | Maize | extracellular | 40.86 | 89.16 |
| TraesCS5B01G544500.1 | Wheat | cytosol | 85.78 | 85.78 |
| TraesCS4A01G329600.1 | Wheat | cytosol | 85.78 | 85.78 |
| TraesCS5D01G543600.1 | Wheat | golgi, unclear | 85.1 | 85.29 |
| GSMUA_Achr2P16950_001 | Banana | cytosol | 78.78 | 82.7 |
| KRH59502 | Soybean | cytosol | 81.72 | 82.09 |
| GSMUA_Achr4P23680_001 | Banana | cytosol | 77.43 | 81.28 |
| HORVU5Hr1G122560.2 | Barley | cytosol, nucleus | 84.42 | 80.95 |
| VIT_07s0031g01970.t01 | Wine grape | cytosol | 81.49 | 80.76 |
| CDY56539 | Canola | cytosol, nucleus | 67.49 | 78.27 |
| KRH64121 | Soybean | cytosol | 78.1 | 78.1 |
| HORVU5Hr1G122430.1 | Barley | plastid | 84.88 | 77.69 |
| Solyc04g051370.2.1 | Tomato | nucleus | 77.2 | 77.38 |
| CDY40066 | Canola | cytosol | 73.59 | 77.25 |
| CDX81147 | Canola | cytosol | 73.59 | 77.25 |
| KRH53822 | Soybean | cytosol | 77.43 | 77.08 |
| Solyc04g012040.2.1 | Tomato | cytosol | 76.75 | 76.92 |
| Bra006038.1-P | Field mustard | cytosol | 73.14 | 76.78 |
| PGSC0003DMT400060796 | Potato | cytosol | 76.52 | 76.7 |
| CDX69878 | Canola | cytosol | 72.23 | 75.83 |
| Bra009074.1-P | Field mustard | cytosol | 72.01 | 75.59 |
| CDY21613 | Canola | cytosol | 72.01 | 75.59 |
| CDX85790 | Canola | cytosol | 76.07 | 75.22 |
| Bra028611.1-P | Field mustard | cytosol | 76.07 | 75.22 |
| KRH43368 | Soybean | vacuole | 81.26 | 75.0 |
| Bra026640.1-P | Field mustard | cytosol | 51.92 | 73.72 |
| AT5G64760.1 | Thale cress | cytosol | 73.36 | 73.53 |
| PGSC0003DMT400050736 | Potato | cytosol | 76.75 | 72.19 |
| HORVU1Hr1G003160.1 | Barley | cytosol, nucleus, plastid | 30.7 | 69.39 |
| KRH43942 | Soybean | cytosol, mitochondrion, nucleus | 23.7 | 69.08 |
| VIT_12s0035g00780.t01 | Wine grape | cytosol | 12.87 | 61.96 |
| AT5G09900.3 | Thale cress | nucleus | 62.3 | 59.74 |
| VIT_08s0058g00020.t01 | Wine grape | cytosol | 10.38 | 56.1 |
| CDY14507 | Canola | cytosol | 9.03 | 55.56 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:103627906 | MapMan:19.2.6.2.2.4 | UniProt:A0A1D6HPZ2 | ProteinID:AQK76348.1 | ProteinID:AQK76356.1 |
| GO:GO:0000502 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | InterPro:IPR000717 | InterPro:IPR036388 |
| InterPro:PCI_dom | PFAM:PF01399 | PFscan:PS50250 | InterPro:PSMD12 | PANTHER:PTHR10855 | PANTHER:PTHR10855:SF1 |
| SMART:SM00088 | SMART:SM00753 | SUPFAM:SSF46785 | UniParc:UPI0002214FBC | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| EnsemblPlantsGene:Zm00001d018523 | EnsemblPlants:Zm00001d018523_P003 | EnsemblPlants:Zm00001d018523_T003 | SEG:seg | : | : |
Description
26S proteasome non-ATPase regulatory subunit 12 homolog B
Coordinates
chr5:-:222461872..222467115
Molecular Weight (calculated)
50528.7 Da
IEP (calculated)
6.869
GRAVY (calculated)
-0.191
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDGTNLDA AIESLLNVEK QMRLAGDVAG TRKAVIDIVE LCYKAGAWKT LNDQIVLLSK RRGQLKQAIT AMVQKAMEYI DLTPGIDTSI ELIKTLSSVS
101: AGKIYVEIER ARLIKRLAKI KEEQGQIYEA ADLMQEVAVE TFGSMAKTEK IAFILEQVRL CLDRQDFVRA QILSRKISTR VFDADPSKEK KKPKEGDSIV
201: QDAPADIPSL LELKRVYYEL MIRYYSHNND YLEICRCYKA IYDIPAIKED PTKWIPILRK ICWYLVLAPH DPMQSSLLNA TLEDKNLSEI PNFRLLLKQL
301: VTMEVIQWTS LWEFFKEEYE KEKDLLGGAL GAKASEDLRL RIIEHNILVV SKYYARVTLE RLADLLCLTL QEAEKHLSDM VNSKSLVAKI DRPMGVVSFR
401: TTQDSNGTLN SWATSLEKLL DLVEKSCHEI HKETMIHKTA LKV
101: AGKIYVEIER ARLIKRLAKI KEEQGQIYEA ADLMQEVAVE TFGSMAKTEK IAFILEQVRL CLDRQDFVRA QILSRKISTR VFDADPSKEK KKPKEGDSIV
201: QDAPADIPSL LELKRVYYEL MIRYYSHNND YLEICRCYKA IYDIPAIKED PTKWIPILRK ICWYLVLAPH DPMQSSLLNA TLEDKNLSEI PNFRLLLKQL
301: VTMEVIQWTS LWEFFKEEYE KEKDLLGGAL GAKASEDLRL RIIEHNILVV SKYYARVTLE RLADLLCLTL QEAEKHLSDM VNSKSLVAKI DRPMGVVSFR
401: TTQDSNGTLN SWATSLEKLL DLVEKSCHEI HKETMIHKTA LKV
001: MGDSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP
Arabidopsis Description
EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.