Factsheet for Os03t0851300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90506	Sorghum	cytosol	93.0	93.0
EES07793	Sorghum	cytosol	92.55	92.55
Zm00001d012844_P002	Maize	plasma membrane	92.33	92.33
TraesCS4A01G329600.1	Wheat	cytosol	91.42	91.42
TraesCS5B01G544500.1	Wheat	cytosol	90.97	90.97
TraesCS5D01G543600.1	Wheat	golgi, unclear	90.74	90.95
Zm00001d018523_P003	Maize	extracellular	90.74	90.74
GSMUA_Achr2P16950_001	Banana	cytosol	83.3	87.44
HORVU5Hr1G122560.2	Barley	cytosol, nucleus	89.84	86.15
Zm00001d009068_P002	Maize	extracellular	39.28	85.71
KRH59502	Soybean	cytosol	84.88	85.26
GSMUA_Achr4P23680_001	Banana	cytosol	80.36	84.36
VIT_07s0031g01970.t01	Wine grape	cytosol	84.2	83.45
HORVU5Hr1G122430.1	Barley	plastid	90.52	82.85
CDY56539	Canola	cytosol, nucleus	70.88	82.2
Solyc04g051370.2.1	Tomato	nucleus	81.49	81.67
CDX81147	Canola	cytosol	77.43	81.28
Solyc04g012040.2.1	Tomato	cytosol	81.04	81.22
CDY40066	Canola	cytosol	77.2	81.04
PGSC0003DMT400060796	Potato	cytosol	80.81	81.0
CDY21613	Canola	cytosol	76.75	80.57
Bra006038.1-P	Field mustard	cytosol	76.75	80.57
CDX69878	Canola	cytosol	76.75	80.57
KRH64121	Soybean	cytosol	80.36	80.36
Bra009074.1-P	Field mustard	cytosol	76.52	80.33
KRH53822	Soybean	cytosol	79.46	79.1
Bra028611.1-P	Field mustard	cytosol	79.68	78.79
CDX85790	Canola	cytosol	79.68	78.79
KRH43368	Soybean	vacuole	84.42	77.92
HORVU1Hr1G003160.1	Barley	cytosol, nucleus, plastid	34.31	77.55
AT5G64760.1	Thale cress	cytosol	76.75	76.92
PGSC0003DMT400050736	Potato	cytosol	80.81	76.01
Bra026640.1-P	Field mustard	cytosol	53.5	75.96
KRH43942	Soybean	cytosol, mitochondrion, nucleus	24.15	70.39
AT5G09900.3	Thale cress	nucleus	63.21	60.61
VIT_12s0035g00780.t01	Wine grape	cytosol	12.42	59.78
CDY14507	Canola	cytosol	9.48	58.33
VIT_08s0058g00020.t01	Wine grape	cytosol	10.16	54.88

Protein Annotations

Gene3D:1.10.10.10	MapMan:19.2.6.2.2.4	EntrezGene:4334802	ProteinID:AAO20069.1	ProteinID:ABF99929.1	EMBL:AK071162
EMBL:AK073581	ProteinID:BAF13828.1	ProteinID:BAS87386.1	ncoils:Coil	GO:GO:0000502	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0008541	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031595	GO:GO:0043161
InterPro:IPR000717	InterPro:IPR036388	EnsemblPlantsGene:Os03g0851300	EnsemblPlants:Os03t0851300-01	InterPro:PCI_dom	PFAM:PF01399
PFscan:PS50250	InterPro:PSMD12	PANTHER:PTHR10855	PANTHER:PTHR10855:SF1	UniProt:Q851Y6	SMART:SM00088
SMART:SM00753	SUPFAM:SSF46785	UniParc:UPI0000002793	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015630442.1

Description

19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 5Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-01);Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-02);Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-03);Similar to 26S proteasome subunit RPN5b. (Os03t0851300-04)

Coordinates

chr3:-:35833974..35837995

Molecular Weight (calculated)

50651.9 Da

IEP (calculated)

7.736

GRAVY (calculated)

-0.221

Length

443 amino acids

Sequence
(BLAST)

001: MEGNSTNLDA AIESLLNVEK QMRLAGDVAG TRKAAIDIVE LCYKAGAWKT LNDQIVVLSK RRGQLKQAIT AMVQKAMEYI DLTPDMDTRI ELIKTLSSVS
101: AGKIYVEIER ARLIKRLAKI KEEQGQIDEA ADLMQEVAVE TFGSMAKTEK IAFILEQVRL CLDRQDYVRA QILSRKISPR VFDADPSKEK KKPKEGDNIV
201: QEAPAEIPSL LELKRIYYEL MIRYYSHNND YLEICRCYKS IYEIPSIKED PSKWIPVLRK ICWYLVLAPH DPMQSSLLNA TLEDKNLSEI PNFRLLLKQL
301: VTMEVIQWTS LWEFFKDEYA NEKNFLGGAL GDKAAEDLKL RIIEHNILVV SKYYSRITLK RLADLLCLSL QEAEKHLSDM VNSKSLIAKI DRPMGVVCFR
401: TAQDSNGILN SWAANLEKLL DLVEKSCHQI HKETMIHKAV LKA

Best Arabidopsis Sequence Match ( AT5G09900.1 )
(BLAST)

001: MGDSGKLEAT IDRLLNEEKQ MRLAENVAGT RKAATEILQL CFDAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTPDIETRIE LIKTLNNVSA
101: GKIYVEIERA RLTKKLAKIK EEQGQIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDRQDFVRAQ ILSRKINPRV FDADTKKDKK KPKEGDNMVE
201: EAPADIPTLL ELKRIYYELM IRYYSHNNEY IEICRSYKAI YDIPSVKETP EQWIPVLRKI CWFLVLAPHD PMQSSLLNAT LEDKNLSEIP DFKMLLKQVV
301: TMEVIQWTSL WNKYKDEFEK EKSMIGGSLG DKAGEDLKLR IIEHNILVVS KYYARITLKR LAELLCLSME EAEKHLSEMV VSKALIAKID RPSGIVCFQI
401: AKDSNEILNS WAGNLEKLLD LVEKSCHQIH KETMVHKAAL RP

Arabidopsis Description

EMB210726S proteasome regulatory subunit, putative (RPN5) [Source:UniProtKB/TrEMBL;Acc:B3H6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.