Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64121 | Soybean | cytosol | 95.06 | 95.49 |
| KRH59502 | Soybean | cytosol | 87.42 | 88.21 |
| GSMUA_Achr2P16950_001 | Banana | cytosol | 80.22 | 84.6 |
| VIT_07s0031g01970.t01 | Wine grape | cytosol | 84.94 | 84.56 |
| KRH43942 | Soybean | cytosol, mitochondrion, nucleus | 28.54 | 83.55 |
| GSMUA_Achr4P23680_001 | Banana | cytosol | 78.43 | 82.7 |
| Solyc04g051370.2.1 | Tomato | nucleus | 81.8 | 82.35 |
| KRH43368 | Soybean | vacuole | 87.42 | 81.04 |
| PGSC0003DMT400060796 | Potato | cytosol | 80.45 | 81.0 |
| Solyc04g012040.2.1 | Tomato | cytosol | 80.45 | 81.0 |
| CDX81147 | Canola | cytosol | 75.96 | 80.09 |
| CDY40066 | Canola | cytosol | 75.96 | 80.09 |
| CDY56539 | Canola | cytosol, nucleus | 68.54 | 79.84 |
| EER90506 | Sorghum | cytosol | 79.1 | 79.46 |
| Os03t0851300-01 | Rice | cytosol | 79.1 | 79.46 |
| EES07793 | Sorghum | cytosol | 79.1 | 79.46 |
| CDX69878 | Canola | cytosol | 75.28 | 79.38 |
| Bra006038.1-P | Field mustard | cytosol | 75.28 | 79.38 |
| CDY21613 | Canola | cytosol | 75.06 | 79.15 |
| Bra009074.1-P | Field mustard | cytosol | 75.06 | 79.15 |
| TraesCS5D01G543600.1 | Wheat | golgi, unclear | 78.2 | 78.73 |
| TraesCS4A01G329600.1 | Wheat | cytosol | 78.2 | 78.56 |
| Zm00001d012844_P002 | Maize | plasma membrane | 78.2 | 78.56 |
| TraesCS5B01G544500.1 | Wheat | cytosol | 77.98 | 78.33 |
| Zm00001d009068_P002 | Maize | extracellular | 35.73 | 78.33 |
| Zm00001d018523_P003 | Maize | extracellular | 77.08 | 77.43 |
| CDX85790 | Canola | cytosol | 77.75 | 77.23 |
| Bra028611.1-P | Field mustard | cytosol | 77.75 | 77.23 |
| PGSC0003DMT400050736 | Potato | cytosol | 81.35 | 76.86 |
| AT5G64760.1 | Thale cress | cytosol | 76.18 | 76.7 |
| Bra026640.1-P | Field mustard | cytosol | 52.58 | 75.0 |
| HORVU5Hr1G122560.2 | Barley | cytosol, nucleus | 77.08 | 74.24 |
| HORVU5Hr1G122430.1 | Barley | plastid | 77.75 | 71.49 |
| VIT_12s0035g00780.t01 | Wine grape | cytosol | 13.26 | 64.13 |
| HORVU1Hr1G003160.1 | Barley | cytosol, nucleus, plastid | 28.09 | 63.78 |
| VIT_08s0058g00020.t01 | Wine grape | cytosol | 11.24 | 60.98 |
| AT5G09900.3 | Thale cress | nucleus | 61.8 | 59.52 |
| CDY14507 | Canola | cytosol | 8.76 | 54.17 |
| OQU77597 | Sorghum | plastid | 7.87 | 34.65 |
| OQU81472 | Sorghum | extracellular | 4.04 | 25.0 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100801382 | MapMan:19.2.6.2.2.4 | UniProt:A0A0R0JH35 | EMBL:ACUP02003486 | EnsemblPlantsGene:GLYMA_06G148300 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000717 | InterPro:IPR036388 | EnsemblPlants:KRH53822 |
| ProteinID:KRH53822 | ProteinID:KRH53822.1 | InterPro:PCI_dom | PFAM:PF01399 | PFscan:PS50250 | InterPro:PSMD12 |
| PANTHER:PTHR10855 | PANTHER:PTHR10855:SF1 | SMART:SM00088 | SMART:SM00753 | SUPFAM:SSF46785 | UniParc:UPI0006ED8348 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:12113248..12118483
Molecular Weight (calculated)
50906.0 Da
IEP (calculated)
7.168
GRAVY (calculated)
-0.233
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLGENVGS LDAAIEQLLN AEKHARLAGD VAATRNAVTE ILRLCFEARA WKTLNDQIAL LSKRRGQLKQ AVTAMVQQAM QYTDETPDLE TRIELIKTLN
101: SVSAGKIYVE IERARLIKKL AKIKEEQGLI AEAADLMQEI AVETFGAMAK TEKIAFILEQ VRLCLDCQDY VRAQILSRKI STRVFDADVT KEKKKPKEGD
201: NVVEEAPADI PSLPELKRIY YELMIRYYSH KNDYLEICRC YKAIYEIPSV KENLAEWIPI LRKICWYLVL SPHDPMQSSL LNSTLEDKNL SEIPNFKLLL
301: KQLVTMEVIQ WTTLWDSYKD EFENQSNLGK NLGEKAAEDL RERVIEHNII VISKYYGRTT LKRLAELLCL SVQEAEKHLS DMVVSKALVA KIDRPMGIVC
401: FQRAKDSNDV LISWAANLER LLDLVEKSCH QIHKETMVHK AALKV
101: SVSAGKIYVE IERARLIKKL AKIKEEQGLI AEAADLMQEI AVETFGAMAK TEKIAFILEQ VRLCLDCQDY VRAQILSRKI STRVFDADVT KEKKKPKEGD
201: NVVEEAPADI PSLPELKRIY YELMIRYYSH KNDYLEICRC YKAIYEIPSV KENLAEWIPI LRKICWYLVL SPHDPMQSSL LNSTLEDKNL SEIPNFKLLL
301: KQLVTMEVIQ WTTLWDSYKD EFENQSNLGK NLGEKAAEDL RERVIEHNII VISKYYGRTT LKRLAELLCL SVQEAEKHLS DMVVSKALVA KIDRPMGIVC
401: FQRAKDSNDV LISWAANLER LLDLVEKSCH QIHKETMVHK AALKV
001: MRLAENVAGT RKAATEILKL CFEAKDWKLL NEQILNLSKK RGQLKQAVQS MVQQAMQYID QTLDIETRIE LIKTLNNVAA GKIYVEIERA RLTKMLAKIK
101: EEQGLIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDQKDFVRAQ ILSRKINPRV FDADTTKEKK KPKEGENMVE EAPADIPTLL VLKRIYYELM
201: IRYYSHNNEY IEICRSYKAI YDIPSVKENP EQWIPVLRKI CWFLALAPHD PMQSSLLNAT LEDKKLSEIP DFKMLLKQIV TMEVIQWTSL WNKYKDEFEN
301: EKNMIGGSLG DKAGEDLKLR IIEHNILVVS KYYSRITFKR LAELLCLTTE EAEKHLSEMV VSKALIAKID RPSGIICFQI VKDSNEILNS WATNLEKLLD
401: LVEKSCHQIH KETMVHKVAL RA
101: EEQGLIAEAA DLMQEVAVET FGAMAKTEKI AFILEQVRLC LDQKDFVRAQ ILSRKINPRV FDADTTKEKK KPKEGENMVE EAPADIPTLL VLKRIYYELM
201: IRYYSHNNEY IEICRSYKAI YDIPSVKENP EQWIPVLRKI CWFLALAPHD PMQSSLLNAT LEDKKLSEIP DFKMLLKQIV TMEVIQWTSL WNKYKDEFEN
301: EKNMIGGSLG DKAGEDLKLR IIEHNILVVS KYYSRITFKR LAELLCLTTE EAEKHLSEMV VSKALIAKID RPSGIICFQI VKDSNEILNS WATNLEKLLD
401: LVEKSCHQIH KETMVHKVAL RA
Arabidopsis Description
RPN5B26S proteasome non-ATPase regulatory subunit 12 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q8VWK0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.