CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55899	Soybean	endoplasmic reticulum, nucleus	46.34	10.73
KRH25643	Soybean	endoplasmic reticulum, nucleus	45.37	10.51
HORVU7Hr1G097500.16	Barley	endoplasmic reticulum, golgi, plasma membrane	28.78	10.07
TraesCS7D01G413800.1	Wheat	cytosol	30.24	10.0
AT4G08140.1	Thale cress	cytosol	3.9	9.52
GSMUA_Achr11P...	Banana	cytosol	40.49	9.35
EES04513	Sorghum	cytosol	39.51	9.06
Zm00001d015259_P001	Maize	cytosol	39.02	8.99
Zm00001d053881_P001	Maize	mitochondrion, plastid	39.02	8.97
Os02t0146700-02	Rice	plasma membrane	39.02	8.91
TraesCS6D01G105500.1	Wheat	golgi	37.56	8.6
TraesCS6A01G116500.1	Wheat	golgi, unclear	37.56	8.6
TraesCS6B01G144500.1	Wheat	cytosol	37.56	8.52
HORVU6Hr1G021020.1	Barley	cytosol	37.07	8.46
TraesCS7B01G322000.1	Wheat	cytosol	36.1	8.41
TraesCS7A01G421700.1	Wheat	cytosol	36.1	8.41
PGSC0003DMT400056260	Potato	cytosol	7.32	8.33
CDY72396	Canola	cytosol	5.85	8.33
Os09t0326800-01	Rice	plasma membrane	36.1	8.31
TraesCS7B01G321900.1	Wheat	cytosol	34.63	8.19
Os06t0699900-01	Rice	plasma membrane	35.61	8.1
Solyc10g008170.2.1	Tomato	cytosol	7.8	7.92
TraesCS7D01G413900.1	Wheat	mitochondrion	31.71	7.82
TraesCS7A01G421600.1	Wheat	mitochondrion	30.24	7.59
KRH30250	Soybean	cytosol	3.9	6.5
CDX99107	Canola	cytosol	7.8	6.18
Bra003811.1-P	Field mustard	endoplasmic reticulum	6.83	5.69
CDY33144	Canola	extracellular	8.29	5.43
CDY65736	Canola	extracellular	10.73	5.42
KRH60454	Soybean	endoplasmic reticulum	12.68	2.58
KRH41754	Soybean	nucleus	12.68	2.58
GSMUA_Achr1P10580_001	Banana	cytosol, nucleus, plasma membrane	1.46	2.07
KRH57774	Soybean	endoplasmic reticulum, plasma membrane	0.49	0.34
KRH57675	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0HID0	EMBL:ACUP02006947	EnsemblPlantsGene:GLYMA_11G171700	GO:GO:0000502
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0019538	GO:GO:0030234	GO:GO:0042176	EnsemblPlants:KRH30269	ProteinID:KRH30269
ProteinID:KRH30269.1	PANTHER:PTHR14950	PANTHER:PTHR14950:SF44	UniParc:UPI0006EDE136	:	:

Description

hypothetical protein

Coordinates

chr11:+:18650465..18652786

Molecular Weight (calculated)

23242.8 Da

IEP (calculated)

4.394

GRAVY (calculated)

-0.333

Length

205 amino acids

Sequence
(BLAST)

001: MGQDLWDCVN LTPSMHSIIK MEAINLLILD ECLHAMKKHP YSLVMSEFYH TTPKENKPSV FGMTASPVNL KAASLCYLHE QIKQMEVEVE EAAKCSSRRS
101: KWQFMGARDV GANEELRQGI TFELDEEMVA DDEDREWLQE IINNSKLSEG YLTLARDIEV MEPKSPEDIY KAMALLGDYI DKEDTSIRIG VIMGLGIAYA
201: GSQNE

Best Arabidopsis Sequence Match ( AT4G28470.1 )
(BLAST)

001: MAPVPDPNSV GGGAKRDEAT TKIPSKDSKK KDDKKEEDLS EEDLQLKQNL ELYVERVQDP NPELQKIALE SMRKEIRDST SSMTSVPKPL KFLRPHYGVL
101: KEFHAKMAES DLKKMLADIL SVLALTMSAE GERESLNYRL NGSESDIGSW GHEYVRNLAG EIAKEYTIRQ GEESSIEDLM DLVQQIVSFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDNTN FRRTCNYLTS AAKYLPGPDD MLVLDIAYMI YIKFAEYPNA LQIALFLDNM QYVKQVFTSC TDLVKKKQFC YMIARHGMTF
301: ELDQEMVAND EDKEALQDIV NNSKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG PSVDSARQNL SATFVNAFVN AGFGQDKLMT VPSDSTSGSA
401: GNWLFKNKEH GKTSAVASLG MIQLWDVETG LGHLDKYFHS NDNPVVAGAL LGVGIVNCGI KNDCDPAFAL LSGYIDNEDS SVRIGAIMGL GIAYAGSQND
501: QIKIRLSPIL NDANAPLDVI AFAALSLGMI YVGSCNEEVA QSIIFALMDR SEAELGEALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLVKGDI HQGPAVIGLA MVAMSEELGL DMEIRSLERV LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMAAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDASL LFCVRIAQGF VHMGKGLLTL NPFHSERLLL SPTALAGIVT LLHACLDMKS IILGKYHYVL
801: YFLVLAMQPR MMLTVDQSLK PISVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATEKYI PLSPILEGFV ILKENPDYRE E

Arabidopsis Description

RPN1B26S proteasome non-ATPase regulatory subunit 2 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q6XJG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.