CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G08140.1	Thale cress	cytosol	41.67	71.43
PGSC0003DMT400056260	Potato	cytosol	55.56	44.44
Solyc10g008170.2.1	Tomato	cytosol	54.86	39.11
CDX99107	Canola	cytosol	61.81	34.36
CDY33144	Canola	extracellular	62.5	28.75
CDY65736	Canola	extracellular	61.11	21.67
CDY31952	Canola	plasma membrane	75.69	12.73
CDY05774	Canola	cytosol	75.69	12.17
CDY29907	Canola	extracellular	67.36	10.89
CDY38389	Canola	cytosol, extracellular	67.36	10.87
CDX92875	Canola	extracellular	66.67	10.77
CDY35187	Canola	cytosol, extracellular	66.67	10.76
CDY14239	Canola	cytosol, extracellular	61.81	10.02
CDX97442	Canola	cytosol	60.42	9.85
GSMUA_Achr11P...	Banana	cytosol	56.25	9.12
TraesCS6A01G116500.1	Wheat	golgi, unclear	53.47	8.6
TraesCS6D01G105500.1	Wheat	golgi	53.47	8.6
Os02t0146700-02	Rice	plasma membrane	53.47	8.57
Os06t0699900-01	Rice	plasma membrane	53.47	8.55
TraesCS6B01G144500.1	Wheat	cytosol	53.47	8.52
HORVU6Hr1G021020.1	Barley	cytosol	52.08	8.35
EES04513	Sorghum	cytosol	51.39	8.28
Zm00001d015259_P001	Maize	cytosol	50.69	8.2
Os09t0326800-01	Rice	plasma membrane	50.0	8.08
Zm00001d053881_P001	Maize	mitochondrion, plastid	50.0	8.07
TraesCS7B01G322000.1	Wheat	cytosol	41.67	6.82
TraesCS7A01G421700.1	Wheat	cytosol	40.97	6.7
TraesCS7B01G321900.1	Wheat	cytosol	39.58	6.57
KRH30269	Soybean	cytosol	8.33	5.85
TraesCS7D01G413800.1	Wheat	cytosol	21.53	5.0
CDY33145	Canola	extracellular	0.69	4.35
TraesCS7D01G413900.1	Wheat	mitochondrion	22.92	3.97
TraesCS7A01G421600.1	Wheat	mitochondrion	22.22	3.92
CDY12178	Canola	cytosol	4.86	0.71
CDX79472	Canola	cytosol, plastid	4.86	0.7
CDY19162	Canola	extracellular	4.86	0.7
CDX84724	Canola	cytosol, plastid	4.86	0.7
CDY23791	Canola	cytosol, plastid	4.86	0.69
HORVU7Hr1G097500.16	Barley	endoplasmic reticulum, golgi, plasma membrane	2.78	0.68
CDY60623	Canola	endoplasmic reticulum, golgi	2.08	0.31
KRH57675	Soybean	cytosol	0.0	0.0
GSMUA_Achr1P10580_001	Banana	cytosol, nucleus, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY72396	EnsemblPlantsGene:GSBRNA2T00028340001	PANTHER:PTHR10943	PANTHER:PTHR10943:SF8	ProteinID:CDY72396	ProteinID:CDY72396.1
SEG:seg	UniParc:UPI0004EE978A	UniProt:A0A078K3Q2	MapMan:35.1	:	:

Description

BnaCnng77420DBnaCnng77420D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K3Q2]

Coordinates

chrLK050773:+:255..2102

Molecular Weight (calculated)

16206.5 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.656

Length

144 amino acids

Sequence
(BLAST)

001: MAPTPDPNSV GGGARKDEAS VNVPSKDPKK KDDKKEDDLS EEDLELKQNL ELYVERVQDP NPDLQRAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHQTMPAS DLKKCLSDIL SVLALTILKN TQTLCRLHYF LITR

Best Arabidopsis Sequence Match ( AT4G08140.1 )
(BLAST)

1: MVQDPNPDLQ KAALESMRQE IRALTSSMTS VPKPLKFLRP QYVTLKAFHE TMADSNLKKY ISDILSVLAL TTLYRLHYFL ITRR

Arabidopsis Description

26S proteasome non-ATPase regulatory subunit-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SYE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.