Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
23198870
mitochondrion: 27297264 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04513 | Sorghum | cytosol | 98.77 | 98.55 |
| Zm00001d015259_P001 | Maize | cytosol | 98.21 | 98.43 |
| Os02t0146700-02 | Rice | plasma membrane | 93.72 | 93.1 |
| TraesCS6A01G116500.1 | Wheat | golgi, unclear | 92.6 | 92.29 |
| TraesCS6D01G105500.1 | Wheat | golgi | 92.49 | 92.18 |
| HORVU6Hr1G021020.1 | Barley | cytosol | 92.26 | 91.65 |
| TraesCS6B01G144500.1 | Wheat | cytosol | 92.38 | 91.15 |
| GSMUA_Achr11P... | Banana | cytosol | 82.17 | 82.55 |
| Solyc07g053650.2.1 | Tomato | nucleus | 72.65 | 78.83 |
| KRH55899 | Soybean | endoplasmic reticulum, nucleus | 76.91 | 77.51 |
| VIT_12s0028g03130.t01 | Wine grape | cytosol | 77.02 | 77.19 |
| KRH25643 | Soybean | endoplasmic reticulum, nucleus | 76.57 | 77.18 |
| PGSC0003DMT400024306 | Potato | cytosol | 77.02 | 76.67 |
| AT2G20580.1 | Thale cress | cytosol | 73.43 | 73.51 |
| CDY38389 | Canola | cytosol, extracellular | 73.09 | 73.09 |
| CDY35187 | Canola | cytosol, extracellular | 73.09 | 73.09 |
| Bra011030.1-P | Field mustard | cytosol | 72.98 | 73.06 |
| Bra024200.1-P | Field mustard | cytosol | 72.76 | 72.84 |
| CDY29907 | Canola | extracellular | 72.65 | 72.73 |
| CDX92875 | Canola | extracellular | 72.65 | 72.73 |
| AT4G28470.1 | Thale cress | cytosol | 72.42 | 72.5 |
| CDY05774 | Canola | cytosol | 72.65 | 72.32 |
| CDY31952 | Canola | plasma membrane | 67.94 | 70.79 |
| Bra036488.1-P | Field mustard | cytosol, extracellular, plasma membrane | 65.25 | 69.87 |
| CDX97442 | Canola | cytosol | 66.7 | 67.38 |
| Bra010366.1-P | Field mustard | cytosol | 66.93 | 67.38 |
| CDY14239 | Canola | cytosol, extracellular | 66.82 | 67.12 |
| Solyc10g008180.1.1 | Tomato | plastid | 54.82 | 66.89 |
| KRH57774 | Soybean | endoplasmic reticulum, plasma membrane | 20.74 | 63.36 |
| AT4G08140.1 | Thale cress | cytosol | 5.94 | 63.1 |
| PGSC0003DMT400056260 | Potato | cytosol | 11.88 | 58.89 |
| KRH57675 | Soybean | cytosol | 19.51 | 57.43 |
| Solyc10g008170.2.1 | Tomato | cytosol | 12.67 | 55.94 |
| CDY72396 | Canola | cytosol | 8.07 | 50.0 |
| CDX99107 | Canola | cytosol | 11.44 | 39.38 |
| KRH30269 | Soybean | cytosol | 8.97 | 39.02 |
| CDY33144 | Canola | extracellular | 12.11 | 34.5 |
| CDY65736 | Canola | extracellular | 13.12 | 28.82 |
| GSMUA_Achr1P10580_001 | Banana | cytosol, nucleus, plasma membrane | 3.25 | 20.0 |
| Bra003811.1-P | Field mustard | endoplasmic reticulum | 4.71 | 17.07 |
| Zm00001d024342_P001 | Maize | plasma membrane | 16.82 | 15.14 |
| Zm00001d049357_P001 | Maize | plasma membrane | 16.48 | 14.88 |
| Zm00001d002373_P006 | Maize | cytosol, plasma membrane | 16.59 | 14.68 |
| Zm00001d026265_P002 | Maize | plasma membrane | 16.59 | 14.48 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:103654920 | MapMan:19.2.6.2.2.1 | InterPro:26S_Psome_Rpn1 | ProteinID:AQK60616.1 | ProteinID:AQK60618.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 |
| GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030234 | GO:GO:0042176 | GO:GO:0050790 | InterPro:IPR011989 |
| UniProt:K7UFV4 | PFAM:PF01851 | PIRSF:PIRSF015965 | PANTHER:PTHR10943 | PANTHER:PTHR10943:SF8 | InterPro:Proteasome/cyclosome_rpt |
| SUPFAM:SSF48371 | UniParc:UPI00022150DD | EnsemblPlantsGene:Zm00001d053881 | EnsemblPlants:Zm00001d053881_P001 | EnsemblPlants:Zm00001d053881_T001 | SEG:seg |
Description
26S proteasome non-ATPase regulatory subunit 2 homolog A
Coordinates
chr4:-:242880578..242889256
Molecular Weight (calculated)
97193.4 Da
IEP (calculated)
4.844
GRAVY (calculated)
-0.008
Length
892 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPENPSPA APAEPSQPPP PAAAAKGKGK KDEKKDDDLS EEDLALKEQL ELYVVRAQDA DPGVQKLALE SMRQEIRSAT SSMTSVPKPL KFLRPHFGTL
101: KSYFETMQES ELKKYMADIL SVLALTMSVE GERESLKYRL LGSEGDIGSW GHEYVRNLAG EIAQEFQKRQ DDDLPIDVLM ELVQQIVSFH MKHNAEPEAV
201: DLLMEVEDLD LLVEHVDATN YKRACLYLTS SSKFLPAPDD MLALDIAYTI YMKFGDLASA LRISLQLEKS TQYVKQVYTA TDDLLLKKQF SYLIARHGLA
301: MEIDDEIAAD DNDKEVLQEI VNNTKLSEGY LTLARDIEVM EPKSPEDIYK VHLIDGRGAS SSLDSARQNL AATFVNAFVN AGFGQDKLMT APSDSSSSGS
401: SGNWLFKNKE HGKASAAASL GMILLWDTDS GLAQLDKYLH SNDTHVVAGA LLGIGIVTCG VKSDCDPAFA ILMEYIGKDD SNIRIGAILG LGIAYAGSQK
501: EELKMHLSAV LGDSQSPLEV LVFSAIAMGL VFVGSCNEEI AQSIIFALME RSEAELAEPI IRLLPVALGL LYLGKQDSVE ATAEVSKTFD EKIGKYCDVT
601: LMSLAYAGTG NVLKVQKLLG ICSQHLEKGE THQGPAVLGI ALIAMAEELG AEMAVRSLER LLQYGEQNIR RAVPLALGIL CISNPKVNVM DTLSRLSHDA
701: DADVSMAAII SLGLIGAGTN NARIAGMLRN LSSYYYKEAA HLFCVRIAQG LVHLGKGLLT LSPYHSDRFL LSPMALGGLV TVLHACLDMK STILGKYHYI
801: LYIIVLAMQP RMLLTVDEDL KPLSVPVRVG QAVDVVGQAG RPKTITGFQT HSTPVLLAAG ERAELATEKY IPLTPVLEGF VILKKNPEYH EE
101: KSYFETMQES ELKKYMADIL SVLALTMSVE GERESLKYRL LGSEGDIGSW GHEYVRNLAG EIAQEFQKRQ DDDLPIDVLM ELVQQIVSFH MKHNAEPEAV
201: DLLMEVEDLD LLVEHVDATN YKRACLYLTS SSKFLPAPDD MLALDIAYTI YMKFGDLASA LRISLQLEKS TQYVKQVYTA TDDLLLKKQF SYLIARHGLA
301: MEIDDEIAAD DNDKEVLQEI VNNTKLSEGY LTLARDIEVM EPKSPEDIYK VHLIDGRGAS SSLDSARQNL AATFVNAFVN AGFGQDKLMT APSDSSSSGS
401: SGNWLFKNKE HGKASAAASL GMILLWDTDS GLAQLDKYLH SNDTHVVAGA LLGIGIVTCG VKSDCDPAFA ILMEYIGKDD SNIRIGAILG LGIAYAGSQK
501: EELKMHLSAV LGDSQSPLEV LVFSAIAMGL VFVGSCNEEI AQSIIFALME RSEAELAEPI IRLLPVALGL LYLGKQDSVE ATAEVSKTFD EKIGKYCDVT
601: LMSLAYAGTG NVLKVQKLLG ICSQHLEKGE THQGPAVLGI ALIAMAEELG AEMAVRSLER LLQYGEQNIR RAVPLALGIL CISNPKVNVM DTLSRLSHDA
701: DADVSMAAII SLGLIGAGTN NARIAGMLRN LSSYYYKEAA HLFCVRIAQG LVHLGKGLLT LSPYHSDRFL LSPMALGGLV TVLHACLDMK STILGKYHYI
801: LYIIVLAMQP RMLLTVDEDL KPLSVPVRVG QAVDVVGQAG RPKTITGFQT HSTPVLLAAG ERAELATEKY IPLTPVLEGF VILKKNPEYH EE
001: MAPTQDPNSV GGGAKKDEAT LKVPSKDPKK KDEKKDEDLS EEDLELKQNL ELYVERVQDP NPELQKAALE SMRQEIRAST SSMTSVPKPL KFLRPHYGTL
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
101: KAFHETMADS DLKKYLSDIL SVLALTMSAD GERESLRFRL IGTEGDIGSW GHEYVRNLAG EIAQEYTKRQ SEEASIDDLM ELVQQIVAFH MKHNAETEAV
201: DLLMDVEDLD LLLEHVDKTN FKRTCNYLTS AARYLPGPDD MLVLDISYMI YMKFEEYPNA LQIALFLDNT QYVKQVFTSC TDLLKKKQFC YMIARHGITF
301: ELDDEMVADD DDREALQDIV NNTKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG ASVDSARQNL AATFVNAFVN AGFGQDKLMT VPSDSTTGSS
401: GNWLFKNKEH GKTSAAASLG MIQLWDVDSG LSQLDKYFHS NDNPIIAGAL LGVGIVNCGI KNDCDPALAL LGDYIDKEDS SVRIGAIMGL GISYAGSQND
501: QIRNKLSPIL NDAKAPLDVI AFASLSLGMI YVGSCNEEVA QSIIFALMDR SEAELGDALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
601: LSCAYAGTGN VLKVQDLLAQ CGEHLEKGDI HQGPAVLGLA MVAMSEELGV DMEIRSLERM LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD
701: SEVAMSAIIS LGLIGAGTNN ARIAGMLRNL SSYYYKDMSL LFCVRIAQGL VHMGKGLLTL SPFHSERFLL SPTALAGIVT LLHACLDMKP IILGKYHYVL
801: YFLVLAMQPR MMLTVDENLK PLSVPVRVGQ AVDVVGQAGR PKTITGFQTH STPVLLAAGE RAELATDKYI PLSPILEGFI ILKENPDYRE E
Arabidopsis Description
RPN1ARPN1A [Source:UniProtKB/TrEMBL;Acc:A0A178VZC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.